RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 RECQLP46063 649 aaPredicted RBP23.99■■□□□ 1.43
SNX3-203ENST00000368979 ZNF140P52738 457 aaPredicted RBP23.99■■□□□ 1.43
SNX3-203ENST00000368979 EPHB1P54762 984 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 ST8SIA6P61647 398 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 GLT6D1Q7Z4J2 308 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 ARFGAP2Q8N6H7 521 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 STYXQ8WUJ0 223 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 SPOCK2Q92563 424 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 ZNF641Q96N77 438 aaPredicted RBP23.99■■□□□ 1.43
SNX3-203ENST00000368979 SUV39H2Q9H5I1 410 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 BRD9Q9H8M2 597 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 HACD3Q9P035 362 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 GGT7Q9UJ14 662 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 COL4A2P08572 1712 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 A0A1W2PPM1 405 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 C2CD4DB7Z1M9 353 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 GOLGA8TH3BQL2 631 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 KRT37O76014 449 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 KRT38O76015 456 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 SNRPAP09012 282 aaKnown RBP23.98■■□□□ 1.43
SNX3-203ENST00000368979 CREB1P16220 341 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 CNTFP26441 200 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 GP5P40197 560 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 LGSNQ5TDP6 509 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 ZSWIM9Q86XI8 627 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 SFTPA1Q8IWL2 248 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 PTPRN2Q92932 1015 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 MAGEE1Q9HCI5 957 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 NSMCE4AQ9NXX6 385 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 PLA2G4CQ9UP65 541 aa23.98■■□□□ 1.43
SNX3-203ENST00000368979 TICRRQ7Z2Z1 1910 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 A0A0J9YYE9 177 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 HMX2A2RU54 273 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 SLC7A4O43246 635 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 TRBC1P01850 177 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 ARSDP51689 593 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 PREPLQ4J6C6 727 aaPredicted RBP23.97■■□□□ 1.43
SNX3-203ENST00000368979 TTC30BQ8N4P2 665 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 OR13C4Q8NGS5 318 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 MTBPQ96DY7 904 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 DNAJC1Q96KC8 554 aaKnown RBP23.97■■□□□ 1.43
SNX3-203ENST00000368979 HEPHQ9BQS7 1158 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 FAM167BQ9BTA0 163 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 MCMBPQ9BTE3 642 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 TRABDQ9H4I3 376 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 NLE1Q9NVX2 485 aaPredicted RBP23.97■■□□□ 1.43
SNX3-203ENST00000368979 WASF2Q9Y6W5 498 aa23.97■■□□□ 1.43
SNX3-203ENST00000368979 TRIM49D1C9J1S8 452 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 KAT7O95251 611 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 ABL2P42684 1182 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 ATP1A2P50993 1020 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 PTPRRQ15256 657 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 CCDC85BQ15834 202 aaPredicted RBP23.96■■□□□ 1.43
SNX3-203ENST00000368979 AAK1Q2M2I8 961 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 GRTP1Q5TC63 336 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 CNPY4Q8N129 248 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 CDX2Q99626 313 aaPredicted RBP23.96■■□□□ 1.43
SNX3-203ENST00000368979 RBBP8Q99708 897 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 MFSD1Q9H3U5 465 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 MTG2Q9H4K7 406 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 TXNDC16Q9P2K2 825 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 ADAM21Q9UKJ8 722 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 ZNF711Q9Y462 761 aa23.96■■□□□ 1.43
SNX3-203ENST00000368979 A0A1W2PQ67 120 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 TBC1D3BA6NDS4 549 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 C2orf81A6NN90 581 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 BUD23O43709 281 aaKnown RBP23.95■■□□□ 1.43
SNX3-203ENST00000368979 RPP40O75818 363 aaKnown RBP23.95■■□□□ 1.43
SNX3-203ENST00000368979 ALPIP09923 528 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 BRAFP15056 766 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 CTPS1P17812 591 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 GRIA2P42262 883 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 CSE1LP55060 971 aaKnown RBP23.95■■□□□ 1.43
SNX3-203ENST00000368979 THOC5Q13769 683 aaKnown RBP23.95■■□□□ 1.43
SNX3-203ENST00000368979 BMPR2Q13873 1038 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 ZNF234Q14588 700 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 PTPRCAPQ14761 206 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 GDPD4Q6W3E5 623 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 STRA8Q7Z7C7 330 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 CSGALNACT1Q8TDX6 532 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 UCMAQ8WVF2 138 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 HDAC10Q969S8 669 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 TBATAQ96M53 351 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 SRPK1Q96SB4 655 aaKnown RBP23.95■■□□□ 1.43
SNX3-203ENST00000368979 PHTF1Q9UMS5 762 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 PPIL1Q9Y3C6 166 aa23.95■■□□□ 1.43
SNX3-203ENST00000368979 CAPN8A6NHC0 703 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 CCL22O00626 93 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 UGT2B4P06133 528 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 LPOP22079 712 aaPredicted RBP23.94■■□□□ 1.42
SNX3-203ENST00000368979 SOX9P48436 509 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 PRAMEP78395 509 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 PDE1BQ01064 536 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 FNDC3BQ53EP0 1204 aaKnown RBP23.94■■□□□ 1.42
SNX3-203ENST00000368979 NEPROQ6NW34 567 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 MICALCLQ6ZW33 695 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 CALML6Q8TD86 181 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 LRIG1Q96JA1 1093 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 LYSMD1Q96S90 227 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 SELENOSQ9BQE4 189 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 410.7 ms