RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TEKT5Q96M29 485 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 QKIQ96PU8 341 aaKnown RBP eCLIP8.92□□□□□ -0.988e-8■■■■■ 32.5
TPM3-213ENST00000368545 CLSTN3Q9BQT9 956 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 TXLNGYQ9BZA5 131 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 NMUR1Q9HB89 426 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 MRPL17Q9NRX2 175 aaKnown RBP8.92□□□□□ -0.98
TPM3-213ENST00000368545 OR12D3Q9UGF7 316 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 TPX2Q9ULW0 747 aaKnown RBP8.92□□□□□ -0.98
TPM3-213ENST00000368545 INVSQ9Y283 1065 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 PTPRZ1P23471 2315 aaPredicted RBP8.92□□□□□ -0.98
TPM3-213ENST00000368545 DCLK1O15075 740 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 ADAM12O43184 909 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 CSH1P0DML2 217 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 CSH2P0DML3 217 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 RARGP13631 454 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 ATF6P18850 670 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 AMPD1P23109 780 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 HSD17B3P37058 310 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 NRG1Q02297 640 aaPredicted RBP8.92□□□□□ -0.98
TPM3-213ENST00000368545 TAF10Q12962 218 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 CAMK1Q14012 370 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 VEPH1Q14D04 833 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 PDK1Q15118 436 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 SLC45A4Q5BKX6 768 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 LRIG3Q6UXM1 1119 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 HOOK3Q86VS8 718 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 UNC45BQ8IWX7 931 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 ANKRD42Q8N9B4 389 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 UBLCP1Q8WVY7 318 aaPredicted RBP8.92□□□□□ -0.98
TPM3-213ENST00000368545 OLFM3Q96PB7 478 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 KLHL5Q96PQ7 755 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 IPPKQ9H8X2 491 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.92□□□□□ -0.98
TPM3-213ENST00000368545 DTLQ9NZJ0 730 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 PAK5Q9P286 719 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 DPP7Q9UHL4 492 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 SIT1Q9Y3P8 196 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 CACNA1HO95180 2353 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 EIF4E1BA6NMX2 242 aaKnown RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 WNT9AO14904 365 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 TP73O15350 636 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 FGF10O15520 208 aaPredicted RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 MFSD11O43934 449 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 PIP5K1CO60331 668 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 SOAT2O75908 522 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 FGF18O76093 207 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 C1RP00736 705 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 APOEP02649 317 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 ZDHHC11BP0C7U3 371 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 RPL17P18621 184 aaKnown RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 ALDH1A3P47895 512 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 PMS2P54278 862 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 GBE1Q04446 702 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 TERF2Q15554 542 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 SNX30Q5VWJ9 437 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 SYCE2Q6PIF2 218 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 TRMT10CQ7L0Y3 403 aaKnown RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 CHST15Q7LFX5 561 aaPredicted RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 IQCKQ8N0W5 287 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 ZCCHC9Q8N567 271 aaKnown RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 FAM71DQ8N9W8 422 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 GLIS1Q8NBF1 620 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 RCBTB1Q8NDN9 531 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 TRMT2BQ96GJ1 504 aaKnown RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 FCRL3Q96P31 734 aaPredicted RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 ZIM3Q96PE6 472 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 BRD8Q9H0E9 1235 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 ZBP1Q9H171 429 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 PABPC3Q9H361 631 aaKnown RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 OSER1Q9NX31 292 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 LUZP4Q9P127 313 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 CBLCQ9ULV8 474 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 ZFP37Q9Y6Q3 630 aaPredicted RBP8.91□□□□□ -0.98
TPM3-213ENST00000368545 PRUNE2Q8WUY3 3088 aa8.91□□□□□ -0.98
TPM3-213ENST00000368545 DOCK4Q8N1I0 1966 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 I6L893 689 aaPredicted RBP8.9□□□□□ -0.98
TPM3-213ENST00000368545 KCNN4O15554 427 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 ZSCAN5DPP0CG00 497 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 CTSAP10619 480 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 SRFP11831 508 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 ERCC2P18074 760 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 HOXC13P31276 330 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 ELF1P32519 619 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 PPP3CCP48454 512 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 PGFP49763 221 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 EIF3BP55884 814 aaKnown RBP8.9□□□□□ -0.98
TPM3-213ENST00000368545 PRKCQQ04759 706 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 PLD1Q13393 1074 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 ACAP2Q15057 778 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 RNASEH2BQ5TBB1 312 aaKnown RBP8.9□□□□□ -0.98
TPM3-213ENST00000368545 ADGRD2Q7Z7M1 963 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 STKLD1Q8NE28 680 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 TFB1MQ8WVM0 346 aaKnown RBP8.9□□□□□ -0.98
TPM3-213ENST00000368545 TBC1D31Q96DN5 1066 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 C1orf74Q96LT6 269 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 CATSPERBQ9H7T0 1116 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 CYP4F11Q9HBI6 524 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 USP29Q9HBJ7 922 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 SLC2A4RGQ9NR83 387 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 DONSONQ9NYP3 566 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms