RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 EPHX1P07099 455 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 NMBRP28336 390 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 TIE1P35590 1138 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 ABL2P42684 1182 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 WASP42768 502 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 GUCY1A3Q02108 690 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 GRSF1Q12849 480 aaKnown RBP eCLIP15.98■□□□□ 0.15
LMNA-203ENST00000368297 LAMB3Q13751 1172 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 EXOC3L1Q86VI1 746 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 STK40Q8N2I9 435 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.98■□□□□ 0.154e-6■■■■□ 21
LMNA-203ENST00000368297 PIH1D2Q8WWB5 315 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 OR8D1Q8WZ84 308 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 CENPTQ96BT3 561 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 MFSD3Q96ES6 412 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 KLHL32Q96NJ5 620 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 FCRL3Q96P31 734 aaPredicted RBP15.98■□□□□ 0.15
LMNA-203ENST00000368297 SMIM14Q96QK8 99 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 TMEM245Q9H330 911 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 PLAC1Q9HBJ0 212 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 MRM3Q9HC36 420 aaKnown RBP15.98■□□□□ 0.15
LMNA-203ENST00000368297 PPANQ9NQ55 473 aaKnown RBP15.98■□□□□ 0.15
LMNA-203ENST00000368297 SLC2A4RGQ9NR83 387 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.98■□□□□ 0.15
LMNA-203ENST00000368297 PSMC3IPQ9P2W1 217 aaPredicted RBP15.98■□□□□ 0.15
LMNA-203ENST00000368297 HCN2Q9UL51 889 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 SPO11Q9Y5K1 396 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 STON1Q9Y6Q2 735 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 WASF2Q9Y6W5 498 aa15.98■□□□□ 0.15
LMNA-203ENST00000368297 CRTAMO95727 393 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 EGFP01133 1207 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 SLC4A1P02730 911 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 HNRNPLP14866 589 aaKnown RBP eCLIP15.97■□□□□ 0.15
LMNA-203ENST00000368297 GLULP15104 373 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 DRD1P21728 446 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 MSLNQ13421 630 aaPredicted RBP15.97■□□□□ 0.15
LMNA-203ENST00000368297 SMAD1Q15797 465 aaKnown RBP15.97■□□□□ 0.15
LMNA-203ENST00000368297 C9orf64Q5T6V5 341 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 IER5LQ5T953 404 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 ARMC3Q5W041 872 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 FSTL4Q6MZW2 842 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 GLT6D1Q7Z4J2 308 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 TMEM135Q86UB9 458 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 ADHFE1Q8IWW8 467 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 NDUFAF2Q8N183 169 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 BRSK1Q8TDC3 778 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 MRRFQ96E11 262 aaKnown RBP15.97■□□□□ 0.15
LMNA-203ENST00000368297 MSANTD3Q96H12 275 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 OSBPL1AQ9BXW6 950 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 SENP1Q9P0U3 644 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 THEGQ9P2T0 379 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 PRKAG3Q9UGI9 489 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 TBK1Q9UHD2 729 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 PHTF1Q9UMS5 762 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 IKBKGQ9Y6K9 419 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 FAM169AQ9Y6X4 670 aa15.97■□□□□ 0.15
LMNA-203ENST00000368297 A0A1W2PQ67 120 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 NPC1O15118 1278 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 PRNPP04156 253 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 CTSLP07711 333 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 ALPIP09923 528 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 LSP1P33241 339 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 MSH2P43246 934 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 EFTUD2Q15029 972 aaKnown RBP eCLIP15.96■□□□□ 0.155e-7■■■■■ 33.9
LMNA-203ENST00000368297 TMED2Q15363 201 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 SLC44A4Q53GD3 710 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 TMEM196Q5HYL7 178 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 TSTD2Q5T7W7 516 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 TTC19Q6DKK2 380 aaPredicted RBP15.96■□□□□ 0.15
LMNA-203ENST00000368297 TRMT10BQ6PF06 316 aaKnown RBP15.96■□□□□ 0.15
LMNA-203ENST00000368297 TPRG1Q6ZUI0 275 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 NLRP9Q7RTR0 991 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 CTAGE3PQ8IX95 158 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 EZH1Q92800 747 aaPredicted RBP15.96■□□□□ 0.15
LMNA-203ENST00000368297 ERLEC1Q96DZ1 483 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 LRIG1Q96JA1 1093 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 ZNF778Q96MU6 729 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 HACD3Q9P035 362 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 CTNNAL1Q9UBT7 734 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 SLC2A6Q9UGQ3 507 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 ARL5AQ9Y689 179 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 MYO10Q9HD67 2058 aa15.96■□□□□ 0.15
LMNA-203ENST00000368297 KPNA3O00505 521 aaPredicted RBP15.95■□□□□ 0.14
LMNA-203ENST00000368297 BUD23O43709 281 aaKnown RBP15.95■□□□□ 0.14
LMNA-203ENST00000368297 BMP1P13497 986 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 KRT15P19012 456 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 PAMP19021 973 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 KIR2DL1P43626 348 aaPredicted RBP15.95■□□□□ 0.14
LMNA-203ENST00000368297 POLR2LP62875 67 aaKnown RBP15.95■□□□□ 0.14
LMNA-203ENST00000368297 ELAVL3Q14576 367 aaKnown RBP15.95■□□□□ 0.14
LMNA-203ENST00000368297 PTPRRQ15256 657 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 KBTBD12Q3ZCT8 623 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 C2orf27AQ580R0 203 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 SDE2Q6IQ49 451 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 ESRP1Q6NXG1 681 aaKnown RBP15.95■□□□□ 0.14
LMNA-203ENST00000368297 DSG4Q86SJ6 1040 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 RASSF3Q86WH2 238 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 ZSWIM9Q86XI8 627 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 UNC5BQ8IZJ1 945 aa15.95■□□□□ 0.14
LMNA-203ENST00000368297 FAM3CQ92520 227 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms