RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 FBXO32Q969P5 355 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 ARMC5Q96C12 935 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 RPRD1AQ96P16 312 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 WDCPQ9H6R7 721 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 PNPOQ9NVS9 261 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 ITGA11Q9UKX5 1188 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 PDXKO00764 312 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 KELP23276 732 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 SNX20Q7Z614 316 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 COL26A1Q96A83 441 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 RACGAP1Q9H0H5 632 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 NT5MQ9NPB1 228 aa11.11□□□□□ -0.63
CDC42BPA-205ENST00000366769 RIMS1Q86UR5 1692 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 TSPAN3O60637 253 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 PIGNO95427 931 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 HSD17B12Q53GQ0 312 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 TRMT11Q7Z4G4 463 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 A8MUA0 341 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 NPY2RP49146 381 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 DCDC1P59894 354 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 CRADDP78560 199 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 ENDOVQ8N8Q3 282 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 ZNF398Q8TD17 642 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 SSX3Q99909 188 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 USP20Q9Y2K6 914 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 SPEF2Q9C093 1822 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 MYO3AQ8NEV4 1616 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 A0A1W2PPW3 197 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 CNSTQ6PJW8 725 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 ADAM32Q8TC27 787 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 PLK2Q9NYY3 685 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 NCANO14594 1321 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 SMAD9O15198 467 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 TPPPO94811 219 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 SNX4O95219 450 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 TMEM47Q9BQJ4 181 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 DSN1Q9H410 356 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 NDUFAF1Q9Y375 327 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 DOCK9Q9BZ29 2069 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 STX11O75558 287 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 SERPINA3P01011 423 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 CDH13P55290 713 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 KLRC3Q07444 240 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 MOGQ16653 247 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 DEF8Q6ZN54 512 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 DPY19L3Q6ZPD9 716 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 FAM220AQ7Z4H9 259 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 TRABD2AQ86V40 505 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 ATP6V0D2Q8N8Y2 350 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 TEX19Q8NA77 164 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 ERMAPQ96PL5 475 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 COA1Q9GZY4 146 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 RSAD1Q9HA92 442 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 GDAP2Q9NXN4 497 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 DHRS7Q9Y394 339 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 TET3O43151 1660 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 OR14I1A6ND48 311 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 RGS10O43665 173 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 CYP2B6P20813 491 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 GPD1P21695 349 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 ORC1Q13415 861 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 MRNIPQ6NTE8 343 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 KYAT3Q6YP21 454 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 FAM20AQ96MK3 541 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 PCDHA10Q9Y5I2 948 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 DOCK11Q5JSL3 2073 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 RBP3P10745 1247 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 GPD2P43304 727 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 LSAMPQ13449 338 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 SPOCD1Q6ZMY3 1216 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 DNAJB14Q8TBM8 379 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 PNPLA8Q9NP80 782 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 PCYOX1Q9UHG3 505 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 H7C1W4 665 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 CD4P01730 458 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 XRCC1P18887 633 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 HMGCS2P54868 508 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 MXD1Q05195 221 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 RBM20Q5T481 1227 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 OGFRL1Q5TC84 451 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 FBXO33Q7Z6M2 555 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 GHDCQ8N2G8 530 aa11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 MRPL42Q9Y6G3 142 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-205ENST00000366769 SPATA31D3P0C874 917 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 C1QTNF12Q5T7M4 302 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 SPATA31D4Q6ZUB0 917 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 DCP1BQ8IZD4 617 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 KIAA0895Q8NCT3 520 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 SNX27Q96L92 541 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 SLC22A4Q9H015 551 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 DNAJC18Q9H819 358 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 BARHL2Q9NY43 387 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 A0A1W2PPM1 405 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 AIREO43918 545 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 RBL1P28749 1068 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 MTHFRP42898 656 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 QRICH1Q2TAL8 776 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ACTL9Q8TC94 416 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms