RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 CCDC42Q96M95 316 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 CCDC3Q9BQI4 270 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 C11orf70Q9BRQ4 267 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 SELENOOQ9BVL4 669 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 CATSPERBQ9H7T0 1116 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 TRMT1Q9NXH9 659 aaKnown RBP12.53□□□□□ -0.4
MRPL55-209ENST00000366735 DKK3Q9UBP4 350 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 KLF15Q9UIH9 416 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 GGT7Q9UJ14 662 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 PADI4Q9UM07 663 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 MFHAS1Q9Y4C4 1052 aa12.53□□□□□ -0.4
MRPL55-209ENST00000366735 KALRNO60229 2985 aa12.52□□□□□ -0.4
MRPL55-209ENST00000366735 ATMQ13315 3056 aa12.52□□□□□ -0.4
MRPL55-209ENST00000366735 C2CD4BA6NLJ0 364 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 CDRT15L2A8MXV6 281 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 K7ENP7 123 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 GFPT2O94808 682 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 CD160O95971 181 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 CYP1A1P04798 512 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-209ENST00000366735 CALB1P05937 261 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 TSHRP16473 764 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 GPD1P21695 349 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 EPHB2P29323 1055 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 GKP32189 559 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 SOX5P35711 763 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 AIF1P55008 147 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 GSCP56915 257 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-209ENST00000366735 YBEYP58557 167 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-209ENST00000366735 SKOR1P84550 965 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 C1orf61Q13536 156 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 LRRC14Q15048 493 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 IRF4Q15306 451 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 PARP15Q460N3 678 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 CCDC14Q49A88 953 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 PERM1Q5SV97 790 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 ATXN7L2Q5T6C5 722 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-209ENST00000366735 INO80CQ6PI98 192 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-209ENST00000366735 SLFN11Q7Z7L1 901 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 DNAAF5Q86Y56 855 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 RTL3Q8N8U3 475 aaKnown RBP12.52□□□□□ -0.41
MRPL55-209ENST00000366735 HCAR2Q8TDS4 363 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 TMEM74Q96NL1 305 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 GFM1Q96RP9 751 aaKnown RBP12.52□□□□□ -0.41
MRPL55-209ENST00000366735 DESI2Q9BSY9 194 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 NDFIP2Q9NV92 336 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 ACTL7AQ9Y615 435 aa12.52□□□□□ -0.41
MRPL55-209ENST00000366735 ZFC3H1O60293 1989 aaKnown RBP12.52□□□□□ -0.41
MRPL55-209ENST00000366735 ARHGEF17Q96PE2 2063 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-209ENST00000366735 FAM170AA1A519 330 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 PLD2O14939 933 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 FGF10O15520 208 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-209ENST00000366735 MMP20O60882 483 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 GCATO75600 419 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 TNFSF15O95150 251 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 IPO7O95373 1038 aaKnown RBP12.51□□□□□ -0.41
MRPL55-209ENST00000366735 KRT3P12035 628 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 C6P13671 934 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 HTR7P34969 479 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 HK3P52790 923 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 KLHL30Q0D2K2 578 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 TPRG1LQ5T0D9 272 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 PCSK4Q6UW60 755 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 PAF1Q8N7H5 531 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 ZNF454Q8N9F8 522 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 TP53I13Q8NBR0 393 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-209ENST00000366735 C3orf20Q8ND61 904 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 PCDH19Q8TAB3 1148 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 SLC20A1Q8WUM9 679 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 UCN2Q96RP3 112 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 WRAP53Q9BUR4 548 aaKnown RBP12.51□□□□□ -0.41
MRPL55-209ENST00000366735 CPEB1Q9BZB8 566 aaKnown RBP12.51□□□□□ -0.41
MRPL55-209ENST00000366735 EPB41L5Q9HCM4 733 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 ADAM22Q9P0K1 906 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 GULP1Q9UBP9 304 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 KLQ9UEF7 1012 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 NOCTQ9UK39 431 aaKnown RBP12.51□□□□□ -0.41
MRPL55-209ENST00000366735 REXO2Q9Y3B8 237 aaKnown RBP12.51□□□□□ -0.41
MRPL55-209ENST00000366735 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
MRPL55-209ENST00000366735 D6RAR5 112 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 YY2O15391 372 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 AKR1B10O60218 316 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 ZIC2O95409 532 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-209ENST00000366735 INHBCP55103 352 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 HDAC4P56524 1084 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 FMO1Q01740 532 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 NFATC4Q14934 902 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 SPA17Q15506 151 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 TMEM52BQ4KMG9 183 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
MRPL55-209ENST00000366735 LRRC73Q5JTD7 316 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 ARTNQ5T4W7 220 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 BRAT1Q6PJG6 821 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 ENPP7Q6UWV6 458 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 LEKR1Q6ZMV7 388 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 JAMLQ86YT9 394 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 HID1Q8IV36 788 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 TXLNBQ8N3L3 684 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 FBXO39Q8N4B4 442 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 CCDC185Q8N715 623 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 KYQ8NBH2 561 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms