RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MS4A13Q5J8X5 152 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 ANKRD20A2Q5SQ80 823 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 ANKRD20A1Q5TYW2 823 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 ANKRD20A3Q5VUR7 823 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 ANKRD22Q5VYY1 191 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 AFMIDQ63HM1 303 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 RWDD4Q6NW29 188 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 B4GALNT4Q76KP1 1039 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 METTL3Q86U44 580 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 LRRC49Q8IUZ0 686 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 NPWQ8N729 165 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 RTL3Q8N8U3 475 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 MCUQ8NE86 351 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 CCDC110Q8TBZ0 833 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 AZIN2Q96A70 460 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 TTC25Q96NG3 672 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 TSGA13Q96PP4 275 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 VAT1Q99536 393 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 LGMNQ99538 433 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 NRSN2Q9GZP1 204 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 RETREG1Q9H6L5 497 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 SPHK2Q9NRA0 654 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 RAB6BQ9NRW1 208 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 NINJ2Q9NZG7 142 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 EIF2B4Q9UI10 523 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 XPO7Q9UIA9 1087 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 DOCK4Q8N1I0 1966 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 MYO9AB2RTY4 2548 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 TEP1Q99973 2627 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 TCRBV7S3A2A0A539 114 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 GOLGA6L10A6NI86 522 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 DRGXA6NNA5 263 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 COCHO43405 550 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 PCDHGA12O60330 932 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 TMEM63AO94886 807 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 C6P13671 934 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 TSHRP16473 764 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 RHOQP17081 205 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 TPSB2P20231 275 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 IL12RB1P42701 662 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 TPMTP51580 245 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 CDK16Q00536 496 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 RHDQ02161 417 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 ZNF844Q08AG5 666 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 WASHC5Q12768 1159 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 SEMA5AQ13591 1074 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 AUHQ13825 339 aaKnown RBP11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 TPSAB1Q15661 275 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 PARP6Q2NL67 630 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 KIF19Q2TAC6 998 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 INAVAQ3KP66 663 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 C5orf22Q49AR2 442 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 CEP85LQ5SZL2 805 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 GRAMD4Q6IC98 578 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 LRRC31Q6UY01 552 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 ARHGEF18Q6ZSZ5 1173 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 C14orf80Q86SX3 495 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 NLRP14Q86W24 1093 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 ARHGAP12Q8IWW6 846 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 CCNYQ8ND76 341 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 FGF11Q92914 225 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 PLD4Q96BZ4 506 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 PWWP2AQ96N64 755 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 PRMT1Q99873 361 aaKnown RBP11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 ROPN1BQ9BZX4 212 aaPredicted RBP11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 SEMA4CQ9C0C4 833 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 ROPN1Q9HAT0 212 aaPredicted RBP11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 ETNK1Q9HBU6 452 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 TMBIM4Q9HC24 238 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 SAYSD1Q9NPB0 183 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 ITM2CQ9NQX7 267 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 DNAJC17Q9NVM6 304 aaKnown RBP11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 TMEM248Q9NWD8 314 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 TRHDEQ9UKU6 1024 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 SNX11Q9Y5W9 270 aa11.38□□□□□ -0.59
CSNK1E-202ENST00000366216 SPTAN1Q13813 2472 aaKnown RBP11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 RNF103O00237 685 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 GFRA2O00451 464 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 TCEA3O75764 348 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 METTL18O95568 372 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 CISD3P0C7P0 127 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 MYZAPP0CAP1 466 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 CCNCP24863 283 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 OXTRP30559 389 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 CCT8P50990 548 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 NDST2P52849 883 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 IFFO1Q0D2I5 559 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 TARDBPQ13148 414 aaKnown RBP eCLIP11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 KIF26BQ2KJY2 2108 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 FUT11Q495W5 492 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 AGBL2Q5U5Z8 902 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 TP53INP2Q8IXH6 220 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 CCDC13Q8IYE1 715 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 PDIK1LQ8N165 341 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 UMODL1-AS1Q8N2C9 162 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 LRRN4Q8WUT4 740 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 FATE1Q969F0 183 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 IGSF8Q969P0 613 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 ZYG11BQ9C0D3 744 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms