RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 XPR1Q9UBH6 696 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 RP1P56715 2156 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 AP5Z1O43299 807 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 RSL1D1O76021 490 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 AP2A2O94973 939 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 CREG2Q8IUH2 290 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 CDYL2Q8N8U2 506 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 OR10H1Q9Y4A9 318 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF780BQ9Y6R6 833 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PIGBOS1A0A0B4J2F0 54 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 CBX4O00257 560 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 IFNA7P01567 189 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 IFNA16P05015 189 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 FESP07332 822 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 SLC9A3P48764 834 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 SPIBQ01892 262 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 GPSM1Q86YR5 675 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 C12orf56Q8IXR9 622 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 MBOAT7Q96N66 472 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 NT5MQ9NPB1 228 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PIH1D1Q9NWS0 290 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 NYAP2Q9P242 653 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 MID1O15344 667 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 ORC5O43913 435 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 FGF19O95750 216 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 SLC5A3P53794 718 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 EIF5AP63241 154 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 ACSM2AQ08AH3 577 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 ST3GAL1Q11201 340 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 ACSM2BQ68CK6 577 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 IGDCC4Q8TDY8 1250 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF354BQ96LW1 612 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 DDX3YO15523 660 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 FTH1P02794 183 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PRH1P02810 166 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 RB1P06400 928 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PSMD5Q16401 504 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 RBM20Q5T481 1227 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PTCD2Q8WV60 388 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 S100A14Q9HCY8 104 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 MAFFQ9ULX9 164 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 CYP27B1O15528 508 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF208O43345 1280 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 TTPAP49638 278 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 FAM46CQ5VWP2 391 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 C16orf46Q6P387 395 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 MOXD1Q6UVY6 613 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 CPNE2Q96FN4 548 aaPredicted RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 TRNT1Q96Q11 434 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 CATSPERZQ9NTU4 200 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PRPF19Q9UMS4 504 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PCDHA3Q9Y5H8 950 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 H3BM21 787 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 CYP17A1P05093 508 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 HNF4AP41235 474 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 UGT2B15P54855 530 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 SNRPD1P62314 119 aaKnown RBP13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 RPP38P78345 283 aaKnown RBP13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 MYBPC1Q00872 1141 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 MBTD1Q05BQ5 628 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 BCL2L1Q07817 233 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 AMHR2Q16671 573 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 PPP1R15BQ5SWA1 713 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 GSTCDQ8NEC7 633 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 S100PBPQ96BU1 408 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 NRP2O60462 931 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 RPL22P35268 128 aaKnown RBP13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 RASGEF1BQ0VAM2 473 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 E2F2Q14209 437 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 ADGRG2Q8IZP9 1017 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 SUSD6Q92537 303 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 ELMO1Q92556 727 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 KAT5Q92993 513 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 ELP3Q9H9T3 547 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 DAGLAQ9Y4D2 1042 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 FAM86C2PA6NEL3 165 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 PLK4O00444 970 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 AMD1P17707 334 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 ACO1P21399 889 aaKnown RBP13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 RRP1BQ14684 758 aaKnown RBP13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 PIK3R6Q5UE93 754 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 SYT12Q8IV01 421 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 WDR49Q8IV35 697 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 C1GALT1C1Q96EU7 318 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 VPS4AQ9UN37 437 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 CEP152O94986 1710 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 I3L521 148 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 TULP2O00295 520 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 SBK1Q52WX2 424 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 ILDR2Q71H61 639 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 NR2F6P10588 404 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 KELP23276 732 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 MNDAP41218 407 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF470Q6ECI4 717 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 MPZL3Q6UWV2 235 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 MCEMP1Q8IX19 187 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 MAP3K4Q9Y6R4 1608 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 CAPN8A6NHC0 703 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms