RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ZW10O43264 779 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 NCK1P16333 377 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 MFSD10Q14728 455 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 NKAPQ8N5F7 415 aaKnown RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 FAM47BQ8NA70 645 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 EXOC2Q96KP1 924 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 CEP295NLQ96MC4 621 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 PNMA5Q96PV4 448 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 FUCA2Q9BTY2 467 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 WDR12Q9GZL7 423 aaKnown RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 SLCO1B3Q9NPD5 702 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 GSAPA4D1B5 854 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 CCNB1P14635 433 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 DRD4P21917 467 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 RFX5P48382 616 aaPredicted RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 ADAM17P78536 824 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 RASAL3Q86YV0 1011 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 ELOVL4Q9GZR5 314 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 ATG10Q9H0Y0 220 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 NEK6Q9HC98 313 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 ZNF446Q9NWS9 450 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 PSME2Q9UL46 239 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 BCORL1Q5H9F3 1711 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 A0A1W2PPM1 405 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 PSMD9O00233 223 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 TSPAN4O14817 238 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 TBL1XO60907 577 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 CDK9P50750 372 aaKnown RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 AFTPHQ6ULP2 937 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 RERGQ96A58 199 aaPredicted RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 VCPIP1Q96JH7 1222 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 ART5Q96L15 291 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 GFM1Q96RP9 751 aaKnown RBP16.09■□□□□ 0.17
COL18A1-203ENST00000359759 CDH19Q9H159 772 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 ABCC13Q9NSE7 274 aa16.09■□□□□ 0.17
COL18A1-203ENST00000359759 NPEPPSL1A6NEC2 478 aa16.08■□□□□ 0.17
COL18A1-203ENST00000359759 RPL22P35268 128 aaKnown RBP16.08■□□□□ 0.17
COL18A1-203ENST00000359759 ROR2Q01974 943 aaKnown RBP16.08■□□□□ 0.17
COL18A1-203ENST00000359759 LIPMQ5VYY2 423 aa16.08■□□□□ 0.17
COL18A1-203ENST00000359759 ADGRA1Q86SQ6 560 aa16.08■□□□□ 0.17
COL18A1-203ENST00000359759 CLCC1Q96S66 551 aa16.08■□□□□ 0.17
COL18A1-203ENST00000359759 BRD9Q9H8M2 597 aa16.08■□□□□ 0.17
COL18A1-203ENST00000359759 CNOT6Q9ULM6 557 aaKnown RBP16.08■□□□□ 0.17
COL18A1-203ENST00000359759 A2ML1A8K2U0 1454 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 PAPSS1O43252 624 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-203ENST00000359759 GMFBP60983 142 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 BNIP2Q12982 314 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 BHLHB9Q6PI77 547 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 GPER1Q99527 375 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 GGA2Q9UJY4 613 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 RGL2O15211 777 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 DBIP07108 87 aaKnown RBP16.08■□□□□ 0.16
COL18A1-203ENST00000359759 SLC6A2P23975 617 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 UGT1A5P35504 534 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 THOP1P52888 689 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 CCDC80Q76M96 950 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 OAFQ86UD1 273 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 RALGPS2Q86X27 583 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-203ENST00000359759 AADATQ8N5Z0 425 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 EIF1ADQ8N9N8 165 aaKnown RBP16.08■□□□□ 0.16
COL18A1-203ENST00000359759 LINGO1Q96FE5 620 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 KCNS3Q9BQ31 491 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 MARCH2Q9P0N8 246 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 FBXL21Q9UKT6 434 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 PXDNLA1KZ92 1463 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 GLRA2P23416 452 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 QPCTQ16769 361 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 CLPTM1LQ96KA5 538 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 MYOCQ99972 504 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 REREQ9P2R6 1566 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 SUV39H1O43463 412 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 RNF220Q5VTB9 566 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 C11orf24Q96F05 449 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-203ENST00000359759 POLLQ9UGP5 575 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 ZNF780BQ9Y6R6 833 aa16.08■□□□□ 0.16
COL18A1-203ENST00000359759 TBC1D3BA6NDS4 549 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 PDE2AO00408 941 aaPredicted RBP16.07■□□□□ 0.16
COL18A1-203ENST00000359759 DDX3YO15523 660 aaKnown RBP16.07■□□□□ 0.16
COL18A1-203ENST00000359759 PAEPP09466 180 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 RARRES1P49788 294 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 SKP1P63208 163 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 SUSD6Q92537 303 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 TBATAQ96M53 351 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 GPN1Q9HCN4 374 aaPredicted RBP16.07■□□□□ 0.16
COL18A1-203ENST00000359759 KANSL3Q9P2N6 904 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 KLF15Q9UIH9 416 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 BTG3Q14201 252 aaPredicted RBP16.07■□□□□ 0.16
COL18A1-203ENST00000359759 FAAH2Q6GMR7 532 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 OR8H1Q8NGG4 311 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 ZNF563Q8TA94 476 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 CXorf40BQ96DE9 158 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 SNX15Q9NRS6 342 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.07■□□□□ 0.166e-7■■■□□ 17.5
COL18A1-203ENST00000359759 SH3D21A4FU49 640 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 MAGEB3O15480 346 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 IFNA6P05013 189 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 SLC7A2P52569 658 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 TSEN15Q8WW01 171 aaKnown RBP16.07■□□□□ 0.16
COL18A1-203ENST00000359759 BORCS5Q969J3 196 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms