RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ZNF235Q14590 738 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 PTPRCAPQ14761 206 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CARTPTQ16568 116 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TMEM135Q86UB9 458 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 LRRC52Q8N7C0 313 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TNIP2Q8NFZ5 429 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 FBXO30Q8TB52 745 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 FAM110BQ8TC76 370 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CCDC126Q96EE4 140 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 C19orf60Q96EN9 201 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 C17orf80Q9BSJ5 609 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 C9orf16Q9BUW7 83 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 GLOD4Q9HC38 313 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CASS4Q9NQ75 786 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TRNAU1APQ9NX07 287 aaKnown RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ABI2Q9NYB9 513 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CD274Q9NZQ7 290 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF229Q9UJW7 825 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 RBMX2Q9Y388 322 aaKnown RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 UTRNP46939 3433 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 UBXN8O00124 270 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 AP3B1O00203 1094 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TOR1BO14657 336 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 USP2O75604 605 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF189O75820 626 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 DDNO94850 711 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 F9P00740 461 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SLC7A1P30825 629 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CD68P34810 354 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 GSSP48637 474 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 GRM2Q14416 872 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 RABL3Q5HYI8 236 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CLEC20AQ6ZU45 233 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 KCTD8Q6ZWB6 473 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TAS2R42Q7RTR8 314 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ERI1Q8IV48 349 aaKnown RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CENPLQ8N0S6 344 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 KDM1BQ8NB78 822 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ZC3H15Q8WU90 426 aaKnown RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ITFG2Q969R8 447 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SLC10A4Q96EP9 437 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 MAML3Q96JK9 1138 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SNX27Q96L92 541 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 PPM1MQ96MI6 270 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CATSPERBQ9H7T0 1116 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 DAPK2Q9UIK4 370 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 VWA7Q9Y334 891 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TSC22D4Q9Y3Q8 395 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 A0A087X1B8 175 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 IGKV6-21A0A0C4DH24 114 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 E5RI56 91 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 AGRPO00253 132 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 PIP5K1BO14986 540 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 FMO4P31512 558 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 DGCR6Q14129 220 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 ANKDD1AQ495B1 522 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 HECTD2Q5U5R9 776 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 GALNT18Q6P9A2 607 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 ABRAXAS1Q6UWZ7 409 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 FRA10AC1Q70Z53 315 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 TAC4Q86UU9 113 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 FNDC5Q8NAU1 212 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 RIN3Q8TB24 985 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 SPPL2BQ8TCT7 592 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 GAB3Q8WWW8 586 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 LRCH3Q96II8 777 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 B3GALT6Q96L58 329 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 C12orf42Q96LP6 360 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 FAM210AQ96ND0 272 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 TMEM74Q96NL1 305 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 PPP1R10Q96QC0 940 aaKnown RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 SENP6Q9GZR1 1112 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF696Q9H7X3 374 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 SPC25Q9HBM1 224 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 RCOR3Q9P2K3 495 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 PCDHGA7Q9Y5G6 932 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 CEPT1Q9Y6K0 416 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 U3KQV3 271 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 GREB1LQ9C091 1923 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 CCDC154A6NI56 674 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 MYO1GB0I1T2 1018 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 NDUFS3O75489 264 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF182P17025 639 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 ALDH4A1P30038 563 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 NRG1Q02297 640 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 SOX4Q06945 474 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 POLD3Q15054 466 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 GPRIN1Q7Z2K8 1008 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 SLC22A9Q8IVM8 553 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 FIBCD1Q8N539 461 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 SCAMP5Q8TAC9 235 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 PCED1BQ96HM7 432 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 FCRL2Q96LA5 508 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 TBATAQ96M53 351 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 NSMCE2Q96MF7 247 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 NPY6RQ99463 290 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 VAT1Q99536 393 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 AKTIPQ9H8T0 292 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 TBC1D13Q9NVG8 400 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms