RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PIRTP0C851 137 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 PRKAR1AP10644 381 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 GNB3P16520 340 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ACTR3P61158 418 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 C1QBPQ07021 282 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 CHST9Q7L1S5 443 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 PAGE2Q7Z2X7 111 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ATOH1Q92858 354 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 IRX2Q9BZI1 471 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 TKTL2Q9H0I9 626 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 SLC32A1Q9H598 525 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ATP13A3Q9H7F0 1226 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 BARHL2Q9NY43 387 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 BTBD7Q9P203 1132 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 WASF3Q9UPY6 502 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 DRG1Q9Y295 367 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 YARS2Q9Y2Z4 477 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 GMNCA6NCL1 334 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 NKRFO15226 690 aaKnown RBP eCLIP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 GRM6O15303 877 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 TLX3O43711 291 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 PPM1BO75688 479 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 CATP04040 527 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 FCER2P06734 321 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 KLK3P07288 261 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF20P17024 532 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 MANFP55145 182 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 NCAPD2Q15021 1401 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 MLC1Q15049 377 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 CFAP52Q8N1V2 620 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 VWDEQ8N2E2 1590 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 EMC1Q8N766 993 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 PTCD2Q8WV60 388 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 RFT1Q96AA3 541 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 B3GNT4Q9C0J1 378 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ELAC1Q9H777 363 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 BLOC1S4Q9NUP1 217 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 MARCH2Q9P0N8 246 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 GTF3C4Q9UKN8 822 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 WDR27A2RRH5 827 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 A6NLC8 198 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 SHOXO15266 292 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 S100A6P06703 90 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 RARGP13631 454 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ACADSP16219 412 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 TUBG1P23258 451 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 DDX6P26196 483 aaKnown RBP eCLIP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 SPAM1P38567 509 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 MMP13P45452 471 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 VBP1P61758 197 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 PLP2Q04941 152 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 MAD2L1Q13257 205 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ATP13A5Q4VNC0 1218 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 FBXO47Q5MNV8 452 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ATPAF1Q5TC12 328 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 SEL1L3Q68CR1 1132 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 NYAP1Q6ZVC0 841 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 MYCBPAPQ8TBZ2 947 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 PNPT1Q8TCS8 783 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 EFHD2Q96C19 240 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 HIC2Q96JB3 615 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 APBA2Q99767 749 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 AIFM2Q9BRQ8 373 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 HERPUD2Q9BSE4 406 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 SEMA6AQ9H2E6 1030 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 B3GAT2Q9NPZ5 323 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ABHD10Q9NUJ1 306 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 CNOT6Q9ULM6 557 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 SAMD4AQ9UPU9 718 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ZFYVE9O95405 1425 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 KPNA4O00629 521 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 MED24O75448 989 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 DGKAP23743 735 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 MAGEA4P43358 317 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 FASLGP48023 281 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 KCNJ1P48048 391 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 TRAF3Q13114 568 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 PCNX4Q63HM2 1172 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 C11orf63Q6NUN7 778 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF627Q7L945 461 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 IFNL1Q8IU54 200 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 CEP97Q8IW35 865 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 C7orf57Q8NEG2 295 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 OR4K17Q8NGC6 315 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 OR56A4Q8NGH8 313 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 RFFLQ8WZ73 363 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 PTCD3Q96EY7 689 aaKnown RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 GAD1Q99259 594 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 FRMD8P1Q9BZ68 369 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-203ENST00000357654 TMEM168Q9H0V1 697 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 METTL7AQ9H8H3 244 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 VPS4AQ9UN37 437 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 GSTK1Q9Y2Q3 226 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 NRCAMQ92823 1304 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 KIAA0586Q9BVV6 1533 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 A0A0U1RQJ8 604 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 E7EQ34 232 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 G3V2T6 193 aa5.82□□□□□ -1.48
BRCA1-203ENST00000357654 BRINP1O60477 761 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms