RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SLC30A10Q6XR72 485 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 UNC5AQ6ZN44 842 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 STK40Q8N2I9 435 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SMG8Q8ND04 991 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 DDX17Q92841 729 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 EBF4Q9BQW3 602 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 DHX35Q9H5Z1 703 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CCSER2Q9H7U1 834 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SNX15Q9NRS6 342 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 AGPAT4Q9NRZ5 378 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 KCNH7Q9NS40 1196 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 ZNFX1Q9P2E3 1918 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NRAPQ86VF7 1730 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 RGS20O76081 388 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 RAP2AP10114 183 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NPR1P16066 1061 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NR4A1P22736 598 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NOMO3P69849 1222 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TMEM44Q2T9K0 475 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 ADGRA1Q86SQ6 560 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 UNC93AQ86WB7 457 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 LACC1Q8IV20 430 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 MPP5Q8N3R9 675 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 OR56A4Q8NGH8 313 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 FBXO27Q8NI29 283 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 PSD2Q9BQI7 771 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SLC39A8Q9C0K1 460 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 GBA3Q9H227 469 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 ANKMY1Q9P2S6 941 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 ZNF451Q9Y4E5 1061 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 PCP4L1A6NKN8 68 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 H3BMM5 538 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TIPRLO75663 272 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 LRIG2O94898 1065 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CD4P01730 458 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SLC4A1P02730 911 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 MBL2P11226 248 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NDST1P52848 882 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 PTPN11Q06124 597 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 GRSF1Q12849 480 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 GDPGP1Q6ZNW5 385 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 GALNT7Q86SF2 657 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 ZC3H7AQ8IWR0 971 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CHERPQ8IWX8 916 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SDR16C5Q8N3Y7 309 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 DUS3LQ96G46 650 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 RETREG1Q9H6L5 497 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 RPF2Q9H7B2 306 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 INIPQ9NRY2 104 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SACM1LQ9NTJ5 587 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SLC38A7Q9NVC3 462 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TFCP2L1Q9NZI6 479 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 KCNH4Q9UQ05 1017 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 FAM155AB1AL88 458 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NR5A2O00482 541 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 RGS13O14921 159 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TFECO14948 347 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 THRBP10828 461 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 HSD17B1P14061 328 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NCF1P14598 390 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 WARSP23381 471 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 YWHAZP63104 245 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CCNA1P78396 465 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 C10orf62Q5T681 223 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CDC73Q6P1J9 531 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 BAIAP2L2Q6UXY1 529 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 PAGE2Q7Z2X7 111 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TRPV1Q8NER1 839 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TAS1R2Q8TE23 839 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CIDECQ96AQ7 238 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 PHF21AQ96BD5 680 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 PRR11Q96HE9 360 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CRAMP1Q96RY5 1269 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 C12orf65Q9H3J6 166 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 MAGED2Q9UNF1 606 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 UGT2A1Q9Y4X1 527 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 COL24A1Q17RW2 1714 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 HTRA2O43464 458 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TSPAN1O60635 241 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TSC22D2O75157 780 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 FUCA1P04066 466 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 MYCLP12524 364 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 UNGP13051 313 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 PRDX5P30044 214 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 GMPRP36959 345 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NPTX2P47972 431 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NFATC3Q12968 1075 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CCDC58Q4VC31 144 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SUSD4Q5VX71 490 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NXNL1Q96CM4 212 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CDK5RAP1Q96SZ6 601 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 CBWD1Q9BRT8 395 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SYT11Q9BT88 431 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 LRRC3Q9BY71 257 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TP63Q9H3D4 680 aaPredicted RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NXF1Q9UBU9 619 aaKnown RBP6.59□□□□□ -1.35
TRIM38-201ENST00000357085 AP4E1Q9UPM8 1137 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TFAP2AP05549 437 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 ERCC2P18074 760 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 TFEBP19484 476 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms