RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 EPB41L1Q9H4G0 881 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SLC35C2Q9NQQ7 365 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 TOR4AQ9NXH8 423 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 GMIPQ9P107 970 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 MOXD2PA6NHM9 499 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 TRAFD1O14545 582 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 LIN7AO14910 233 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 CHP2O43745 196 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SLC28A2O43868 658 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 TNFRSF21O75509 655 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 CST1P01037 141 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ALOX5P09917 674 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 TFEBP19484 476 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 UBA1P22314 1058 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 SLC6A2P23975 617 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 GRIA3P42263 894 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PLK1P53350 603 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PNLIPRP1P54315 467 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 GMFBP60983 142 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 MRPS22P82650 360 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 ELP6Q0PNE2 266 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 DPYSQ14117 519 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ATP13A4Q4VNC1 1196 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 DDI2Q5TDH0 399 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 DENND5AQ6IQ26 1287 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 CAPN13Q6MZZ7 669 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 TAPT1Q6NXT6 567 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 TMPRSS11AQ6ZMR5 421 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 CATSPERGQ6ZRH7 1159 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 ZCCHC23Q6ZST2 131 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 MARK2Q7KZI7 788 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 APTXQ7Z2E3 356 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 ATCAYQ86WG3 371 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 LRRC52Q8N7C0 313 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 SRFBP1Q8NEF9 429 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 BPIFB6Q8NFQ5 453 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 TSPAN14Q8NG11 270 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 NEK7Q8TDX7 302 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PTCD2Q8WV60 388 aaKnown RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 TCF12Q99081 682 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 HOPXQ9BPY8 73 aaPredicted RBP6.49□□□□□ -1.37
UPF2-201ENST00000356352 AIF1LQ9BQI0 150 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 PCDH12Q9NPG4 1184 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 TBC1D14Q9P2M4 693 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 RWDD3Q9Y3V2 267 aa6.49□□□□□ -1.37
UPF2-201ENST00000356352 TCRBV5S4A2TA0A5A2 114 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 AZIN1O14977 448 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 PRODHO43272 600 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 PTPRAP18433 802 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 CDH8P55286 799 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 RTP1P59025 263 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 PUDPQ08623 228 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 NTRK3Q16288 839 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 ATP13A5Q4VNC0 1218 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 MIIPQ5JXC2 388 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 UNC5AQ6ZN44 842 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 GCNT7Q6ZNI0 430 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 CCDC80Q76M96 950 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 TTC7BQ86TV6 843 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 MCEMP1Q8IX19 187 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 CDCA5Q96FF9 252 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 MYO19Q96H55 970 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 PANX1Q96RD7 426 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 COPS8Q99627 209 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 MRIQ9BWK5 157 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 FAM124BQ9H5Z6 455 aaPredicted RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 A0A0X1KG70 313 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 FAM92AA1XBS5 289 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 RFXANKO14593 260 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 PGRMC2O15173 223 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 LRIG2O94898 1065 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 FSBPO95073 299 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 TGDSO95455 350 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 APODP05090 189 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 ELFN1P0C7U0 828 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 IGFBP4P22692 258 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 ADSLP30566 484 aaPredicted RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 GRM5P41594 1212 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 ASMTP46597 345 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 CDK9P50750 372 aaKnown RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 MPPE1Q53F39 396 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 CEP68Q76N32 757 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 ARHGAP22Q7Z5H3 698 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 YTHDF3Q7Z739 585 aaKnown RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 REM2Q8IYK8 340 aaPredicted RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 PCDH20Q8N6Y1 951 aaKnown RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 SLC4A11Q8NBS3 891 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 ZNF563Q8TA94 476 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 ZHX1-C8orf76Q96EF9 292 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 FAM163AQ96GL9 167 aaPredicted RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 SNRNP25Q9BV90 132 aaKnown RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 WDR12Q9GZL7 423 aaKnown RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 LRMDAQ9H2I8 198 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 LRRC19Q9H756 370 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 RAPGEFL1Q9UHV5 662 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 GPC6Q9Y625 555 aaPredicted RBP6.48□□□□□ -1.37
UPF2-201ENST00000356352 PTPRMP28827 1452 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 A0A087X0B3 334 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 ANKRD63C9JTQ0 380 aa6.48□□□□□ -1.37
UPF2-201ENST00000356352 HDAC3O15379 428 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms