RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 TRBC1P01850 177 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 PIRTP0C851 137 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 EPHB1P54762 984 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 PDE1BQ01064 536 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 TAF1AQ15573 450 aaPredicted RBP9.65□□□□□ -0.86
NPHP1-202ENST00000355301 SMAD2Q15796 467 aaKnown RBP9.65□□□□□ -0.86
NPHP1-202ENST00000355301 SKIDA1Q1XH10 827 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 HNRNPA1L2Q32P51 320 aaKnown RBP9.65□□□□□ -0.86
NPHP1-202ENST00000355301 TEDDM1Q5T9Z0 273 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 EMC10Q5UCC4 262 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 GLT6D1Q7Z4J2 308 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 EXOC3L1Q86VI1 746 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 RASSF3Q86WH2 238 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 ZSWIM9Q86XI8 627 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 SFTPA1Q8IWL2 248 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 SUGP1Q8IWZ8 645 aaKnown RBP9.65□□□□□ -0.86
NPHP1-202ENST00000355301 MDGA1Q8NFP4 955 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 MZB1Q8WU39 189 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 STYXQ8WUJ0 223 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 UCMAQ8WVF2 138 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 SRPK1Q96SB4 655 aaKnown RBP9.65□□□□□ -0.86
NPHP1-202ENST00000355301 CPNE1Q99829 537 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 HEPHQ9BQS7 1158 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 TMEM245Q9H330 911 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 TRABDQ9H4I3 376 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 ZDHHC6Q9H6R6 413 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 UGT1A7Q9HAW7 530 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 UGT1A10Q9HAW8 530 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 UGT1A8Q9HAW9 530 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 KCNK12Q9HB15 430 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 NSMCE4AQ9NXX6 385 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 SENP1Q9P0U3 644 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 PPIL1Q9Y3C6 166 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 ACTL7BQ9Y614 415 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 WASF2Q9Y6W5 498 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 COL4A2P08572 1712 aa9.65□□□□□ -0.86
NPHP1-202ENST00000355301 C2orf81A6NN90 581 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 SLC7A4O43246 635 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 SIN3BO75182 1162 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 FAM155BO75949 473 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 KRT37O76014 449 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 KRT38O76015 456 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 APODP05090 189 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 KRT15P19012 456 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 NR1D1P20393 614 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 CNTFP26441 200 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 SOX9P48436 509 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 SERPINB9P50453 376 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 ZNF140P52738 457 aaPredicted RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 ZNF234Q14588 700 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 FNDC3BQ53EP0 1204 aaKnown RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 LGSNQ5TDP6 509 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 PACS1Q6VY07 963 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 GDPD4Q6W3E5 623 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 TAOK1Q7L7X3 1001 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 TRABD2AQ86V40 505 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 SLC44A3Q8N4M1 653 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 FAM76AQ8TAV0 307 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 SMIM14Q96QK8 99 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 LYSMD1Q96S90 227 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 AGAP2Q99490 1192 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 C19orf43Q9BQ61 176 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 OSBPL1AQ9BXW6 950 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 NLE1Q9NVX2 485 aaPredicted RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 SLC17A6Q9P2U8 582 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 THAP10Q9P2Z0 257 aaPredicted RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 HCN2Q9UL51 889 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 PHTF1Q9UMS5 762 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 KCTD3Q9Y597 815 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 PSAT1Q9Y617 370 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 EDDM13A0A1B0GTR0 161 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 CAPN8A6NHC0 703 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 GOLGA8TH3BQL2 631 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 LEFTY1O75610 366 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 UGT2B4P06133 528 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 SNRPAP09012 282 aaKnown RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 LPOP22079 712 aaPredicted RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 CTHP32929 405 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 HMGCLP35914 325 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 GP5P40197 560 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 ABL2P42684 1182 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 GALK1P51570 392 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 ARSDP51689 593 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 POLR2LP62875 67 aaKnown RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 LEXMQ3ZCV2 418 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 BRAT1Q6PJG6 821 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 TTC30BQ8N4P2 665 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 DEFB123Q8N688 67 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 ZNF366Q8N895 744 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 OR13C4Q8NGS5 318 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 HCAR2Q8TDS4 363 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 DNASE1L2Q92874 299 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 HDAC10Q969S8 669 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 MTBPQ96DY7 904 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 SCRN2Q96FV2 425 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 DNAJC1Q96KC8 554 aaKnown RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 MCCC1Q96RQ3 725 aaPredicted RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 P2RY13Q9BPV8 354 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 MCMBPQ9BTE3 642 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms