RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TBCAO75347 108 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ABCB1P08183 1280 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 INHBAP08476 426 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SCG2P13521 617 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 LBPP18428 481 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SAT1P21673 171 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TBXAS1P24557 533 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TKTP29401 623 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 MSH2P43246 934 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 DGKQP52824 942 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 MZT1Q08AG7 82 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 GOLGA8DPQ0D2H9 430 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 NIPAL4Q0D2K0 466 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ICAM4Q14773 271 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CRYMQ14894 314 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SLC39A14Q15043 492 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 EDRF1Q3B7T1 1238 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SLC39A12Q504Y0 691 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SP5Q6BEB4 398 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TMEM154Q6P9G4 183 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 IYDQ6PHW0 289 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 FAM83HQ6ZRV2 1179 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 HTR3DQ70Z44 454 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PRSS45Q7RTY3 260 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CAMKMTQ7Z624 323 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SYCP3Q8IZU3 236 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF619Q8N2I2 560 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 DPP10Q8N608 796 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 Q8TCH9 128 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 GPT2Q8TD30 523 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 DEPDC1BQ8WUY9 529 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 FBXL20Q96IG2 436 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF845Q96IR2 970 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 Q96MF0 132 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TEPSINQ96N21 525 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SPATA13Q96N96 652 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF558Q96NG5 402 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PRAM1Q96QH2 718 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TM2D2Q9BX73 214 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CIPCQ9C0C6 399 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 DEF6Q9H4E7 631 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SERHL2Q9H4I8 314 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CNOT10Q9H9A5 744 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 HAO2Q9NYQ3 351 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 HAO1Q9UJM8 370 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 RNF150Q9ULK6 438 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CENPVL1A0A0U1RR11 272 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TRBC2A0A5B9 178 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 OR6C68A6NDL8 312 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 C3orf70A6NLC5 250 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 MCIDASD6RGH6 385 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ATP2A1O14983 1001 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ST8SIA3O43173 380 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SEC14L5O43304 696 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TMPRSS11DO60235 418 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TOMM70O94826 608 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SERPINC1P01008 464 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 HEXAP06865 529 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SNRNP70P08621 437 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 FDPSP14324 419 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TACR2P21452 398 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PON1P27169 355 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SHMT1P34896 483 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 COMPP49747 757 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 METAP2P50579 478 aaKnown RBP eCLIP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 HSPA2P54652 639 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SUMO2P61956 95 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 YPEL5P62699 121 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SORDQ00796 357 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 BFSP1Q12934 665 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CAPSQ13938 189 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 NTRK2Q16620 822 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 HYAL4Q2M3T9 481 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 KRTAP21-3Q3LHN1 58 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 NHSL2Q5HYW2 709 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 NAIF1Q69YI7 327 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 RAB12Q6IQ22 244 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TATDN1Q6P1N9 297 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 VWA1Q6PCB0 445 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TAOK1Q7L7X3 1001 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 DSG4Q86SJ6 1040 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ANKRD35Q8N283 1001 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 C12orf76Q8N812 135 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 FIBINQ8TAL6 211 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 IGFBPL1Q8WX77 278 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CELF1Q92879 486 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 GBP5Q96PP8 586 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SMC6Q96SB8 1091 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 NPAS1Q99742 590 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ADGRE3Q9BY15 652 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 GPR88Q9GZN0 384 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 LHPPQ9H008 270 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ZCWPW1Q9H0M4 648 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ABCG4Q9H172 646 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 OLAHQ9NV23 265 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SEPT10Q9P0V9 454 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SEC63Q9UGP8 760 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CDH22Q9UJ99 828 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 FZD4Q9ULV1 537 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 NOX1Q9Y5S8 564 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms