RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 MYLK3Q32MK0 819 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 LRRC23Q53EV4 343 aaPredicted RBP12.18□□□□□ -0.46
DDX4-201ENST00000353507 MTX3Q5HYI7 312 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 KRT80Q6KB66 452 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 AMIGO2Q86SJ2 522 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 LRRC49Q8IUZ0 686 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 TRMOQ9BU70 441 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 OSBPL11Q9BXB4 747 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 SARDHQ9UL12 918 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 PTPRDP23468 1912 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 ATP6AP2A0A1C7CYW4 349 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 H0YJX3 145 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 ATP6AP2O75787 350 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 ZNF865P0CJ78 1059 aaPredicted RBP12.18□□□□□ -0.46
DDX4-201ENST00000353507 TSPAN8P19075 237 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 YWHAQP27348 245 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 CD86P42081 329 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 MAXP61244 160 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 GALNT1Q10472 559 aaPredicted RBP12.18□□□□□ -0.46
DDX4-201ENST00000353507 MAPRE1Q15691 268 aaKnown RBP12.18□□□□□ -0.46
DDX4-201ENST00000353507 C9orf131Q5VYM1 1079 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 KDELC1Q6UW63 502 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 CHERPQ8IWX8 916 aaKnown RBP12.18□□□□□ -0.46
DDX4-201ENST00000353507 OR9I1Q8NGQ6 314 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 ZFP28Q8NHY6 868 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 ANKRD49Q8WVL7 239 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 PABPC5Q96DU9 382 aaKnown RBP12.18□□□□□ -0.46
DDX4-201ENST00000353507 TMEM209Q96SK2 561 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 SLC2A11Q9BYW1 496 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 GSTO2Q9H4Y5 243 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 PADI4Q9UM07 663 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 VWA7Q9Y334 891 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 HS3ST4Q9Y661 456 aa12.18□□□□□ -0.46
DDX4-201ENST00000353507 BPTFQ12830 3046 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 TDRD15B5MCY1 1934 aaKnown RBP12.17□□□□□ -0.46
DDX4-201ENST00000353507 PATJQ8NI35 1801 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 POMCP01189 267 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 ASLP04424 464 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 SLC7A1P30825 629 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 GRIK1P39086 918 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 RENBPP51606 427 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 SLC7A2P52569 658 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 MAP2K5Q13163 448 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 EIF4EBP2Q13542 120 aaPredicted RBP12.17□□□□□ -0.46
DDX4-201ENST00000353507 IKBKEQ14164 716 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 USP41Q3LFD5 358 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 TMEM259Q4ZIN3 620 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 GPR158Q5T848 1215 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 OVOS1Q6IE37 1185 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 FAM45BPQ6NSW5 357 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 AGMOQ6ZNB7 445 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 DHFR2Q86XF0 187 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 CILP2Q8IUL8 1156 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 SPATA2LQ8IUW3 424 aaPredicted RBP12.17□□□□□ -0.46
DDX4-201ENST00000353507 THEM5Q8N1Q8 247 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 PCYOX1LQ8NBM8 494 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 OR10T2Q8NGX3 314 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 FAM45AQ8TCE6 357 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 C19orf60Q96EN9 201 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 ZNF597Q96LX8 424 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 CCT7Q99832 543 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 SP110Q9HB58 689 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 FLRT1Q9NZU1 646 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 ATXN10Q9UBB4 475 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 DSEQ9UL01 958 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 CNOT6Q9ULM6 557 aaKnown RBP12.17□□□□□ -0.46
DDX4-201ENST00000353507 TTC3P53804 2025 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 TMCC1O94876 653 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 SLC4A1P02730 911 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 IMPDH1P20839 514 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 FSCN1Q16658 493 aaKnown RBP12.17□□□□□ -0.46
DDX4-201ENST00000353507 TFAP2DQ7Z6R9 452 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 C14orf80Q86SX3 495 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 LDB1Q86U70 411 aaPredicted RBP12.17□□□□□ -0.46
DDX4-201ENST00000353507 TRIML2Q8N7C3 387 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 PNPLA1Q8N8W4 532 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 B4GALNT2Q8NHY0 566 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 UBXN10Q96LJ8 280 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 RANBP9Q96S59 729 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 CIB1Q99828 191 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 TMEM79Q9BSE2 394 aa12.17□□□□□ -0.46
DDX4-201ENST00000353507 RBM38Q9H0Z9 239 aaKnown RBP12.17□□□□□ -0.46
DDX4-201ENST00000353507 TCRBV3S1A0A5B6 114 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 C7orf72A4D263 438 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 ZNF839A8K0R7 811 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 CCL22O00626 93 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 ZNF678Q5SXM1 525 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 MARC1Q5VT66 337 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 AFMIDQ63HM1 303 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 MYO1HQ8N1T3 1032 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 RYBPQ8N488 228 aaPredicted RBP12.16□□□□□ -0.46
DDX4-201ENST00000353507 TSPAN14Q8NG11 270 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 OR13J1Q8NGT2 312 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 IMP4Q96G21 291 aaKnown RBP12.16□□□□□ -0.46
DDX4-201ENST00000353507 DNAJC1Q96KC8 554 aaKnown RBP12.16□□□□□ -0.46
DDX4-201ENST00000353507 SERPINB11Q96P15 392 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 SENP6Q9GZR1 1112 aaPredicted RBP12.16□□□□□ -0.46
DDX4-201ENST00000353507 ARNT2Q9HBZ2 717 aa12.16□□□□□ -0.46
DDX4-201ENST00000353507 FBRSL1Q9HCM7 1045 aaKnown RBP12.16□□□□□ -0.46
DDX4-201ENST00000353507 VPS45Q9NRW7 570 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms