RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FAM47DPA6NHR8 397 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 ERI2A8K979 691 aaKnown RBP8.33□□□□□ -1.08
CD44-205ENST00000352818 I6L893 689 aaPredicted RBP8.33□□□□□ -1.08
CD44-205ENST00000352818 RNF103O00237 685 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 FGF10O15520 208 aaPredicted RBP8.33□□□□□ -1.08
CD44-205ENST00000352818 FLRT2O43155 660 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 CREB3O43889 395 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 BANF1O75531 89 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 SOAT2O75908 522 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 ALDH1A2O94788 518 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 METTL18O95568 372 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 C1QAP02745 245 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 ITGB2P05107 769 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 APRTP07741 180 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 JUPP14923 745 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 SSTR1P30872 391 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 YWHAGP61981 247 aaKnown RBP eCLIP8.33□□□□□ -1.08
CD44-205ENST00000352818 COG7P83436 770 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 TLE1Q04724 770 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 VAC14Q08AM6 782 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 WASHC5Q12768 1159 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 SMARCB1Q12824 385 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 NAB1Q13506 487 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 FRG1Q14331 258 aaKnown RBP8.33□□□□□ -1.08
CD44-205ENST00000352818 HLA-BQ31612 363 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 LINC00303Q3SY05 128 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 MANEALQ5VSG8 457 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 GKAP1Q5VSY0 366 aaPredicted RBP8.33□□□□□ -1.08
CD44-205ENST00000352818 ZNF280DQ6N043 979 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 LRRC8BQ6P9F7 803 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 ZNF449Q6P9G9 518 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 RGS9BPQ6ZS82 235 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 CCNJLQ8IV13 435 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 KLHDC8BQ8IXV7 354 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 CMTM8Q8IZV2 173 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 AGGF1Q8N302 714 aaeCLIP8.33□□□□□ -1.08
CD44-205ENST00000352818 DENND1AQ8TEH3 1009 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 C2orf15Q8WU43 125 aaKnown RBP8.33□□□□□ -1.08
CD44-205ENST00000352818 SLC44A1Q8WWI5 657 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 P2RY11Q96G91 374 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 CEP295NLQ96MC4 621 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 SERPINB11Q96P15 392 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 LGMNQ99538 433 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 EBNA1BP2Q99848 306 aaKnown RBP8.33□□□□□ -1.08
CD44-205ENST00000352818 PRMT1Q99873 361 aaKnown RBP8.33□□□□□ -1.08
CD44-205ENST00000352818 NAT9Q9BTE0 207 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 MAGEB5Q9BZ81 275 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 ZDHHC5Q9C0B5 715 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 TRABDQ9H4I3 376 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 FBXO44Q9H4M3 255 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 WDCPQ9H6R7 721 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 ANLNQ9NQW6 1124 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 SCML2Q9UQR0 700 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 MFHAS1Q9Y4C4 1052 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 PDZD2O15018 2839 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SYNJ2BP-COX16A0A087WUM0 186 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 TCRBV21S2A2A0A5A6 115 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 WASH4PA8MWX3 477 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 POC1B-GALNT4F8VUJ3 575 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 FAM72CH0Y354 149 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 CBX4O00257 560 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 TM9SF1O15321 606 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 TYROBPO43914 113 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SUN1O94901 812 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 ZWINTO95229 277 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 MAP3K6O95382 1288 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 KLF8O95600 359 aaPredicted RBP8.32□□□□□ -1.08
CD44-205ENST00000352818 ASMTLO95671 621 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 APOEP02649 317 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 OR4Q2P0C623 313 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 GABRG2P18507 467 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 PTPN3P26045 913 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 CCR1P32246 355 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 GRIK1P39086 918 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 MSH2P43246 934 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 CORO7P57737 925 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 IL9RQ01113 521 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 DUSP4Q13115 394 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 ITIH4Q14624 930 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 EML3Q32P44 896 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SLC39A12Q504Y0 691 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 ACBD5Q5T8D3 534 aaPredicted RBP8.32□□□□□ -1.08
CD44-205ENST00000352818 FAM72AQ5TYM5 149 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 BTBD8Q5XKL5 378 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 FAM72DQ6L9T8 149 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 C6orf89Q6UWU4 347 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 DENND5BQ6ZUT9 1274 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SCD5Q86SK9 330 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 MON1AQ86VX9 555 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SLC26A11Q86WA9 606 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 FAM72BQ86X60 149 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 LRRC49Q8IUZ0 686 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 IGDCC3Q8IVU1 814 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 CACNA2D3Q8IZS8 1091 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 LZTR1Q8N653 840 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 GSDMBQ8TAX9 411 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SPPL2BQ8TCT7 592 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 EDEM1Q92611 657 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 PSMG2Q969U7 264 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SEC16BQ96JE7 1060 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms