RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 NUP93Q8N1F7 819 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 PHF21BQ96EK2 531 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 TIMMDC1Q9NPL8 285 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 MIOSQ9NXC5 875 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 NLRC5Q86WI3 1866 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 H3BNH8 94 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 H3BSA7 217 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 EML3Q32P44 896 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 TIGD5Q53EQ6 642 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 PRAMEF19Q5SWL8 479 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 FAM219BQ5XKK7 198 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 FAM171BQ6P995 826 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 ANKFN1Q8N957 763 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 L3HYPDHQ96EM0 354 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 CCT7Q99832 543 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 PNPLA3Q9NST1 481 aa24.63■■□□□ 1.53
CPNE1-202ENST00000352393 IMPDH1P20839 514 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 SLC7A2P52569 658 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 HPCAP84074 193 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 PCSK7Q16549 785 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 CLEC6AQ6EIG7 209 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 LAYNQ6UX15 382 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 PLEKHH3Q7Z736 793 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 EGFL6Q8IUX8 553 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 SLC10A4Q96EP9 437 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 FCRL2Q96LA5 508 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-202ENST00000352393 ZNF512Q96ME7 567 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-202ENST00000352393 CIB1Q99828 191 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 EFHD1Q9BUP0 239 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 ANKRD60Q9BZ19 345 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 OSER1Q9NX31 292 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 HTRA2O43464 458 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-202ENST00000352393 USP46P62068 366 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 FUNDC1Q8IVP5 155 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 MYO1HQ8N1T3 1032 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 RTL3Q8N8U3 475 aaKnown RBP24.62■■□□□ 1.53
CPNE1-202ENST00000352393 OR13J1Q8NGT2 312 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 RNF217Q8TC41 542 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 ROPN1LQ96C74 230 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 MS4A4AQ96JQ5 239 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 TMEM79Q9BSE2 394 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 SMOC2Q9H3U7 446 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 FAM105AQ9NUU6 356 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 OLAHQ9NV23 265 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 TMLHEQ9NVH6 421 aa24.62■■□□□ 1.53
CPNE1-202ENST00000352393 MRPL42Q9Y6G3 142 aaKnown RBP24.62■■□□□ 1.53
CPNE1-202ENST00000352393 C17orf102A2RUQ5 167 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 ALDOCP09972 364 aaKnown RBP24.61■■□□□ 1.53
CPNE1-202ENST00000352393 ATP6V1B2P21281 511 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 ZNF678Q5SXM1 525 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 OLFML2BQ68BL8 750 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 DHFR2Q86XF0 187 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 CILP2Q8IUL8 1156 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 GABPB2Q8TAK5 448 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-202ENST00000352393 PKMYT1Q99640 499 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 PAAF1Q9BRP4 392 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 SLC25A51Q9H1U9 297 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 NOL11Q9H8H0 719 aaKnown RBP24.61■■□□□ 1.53
CPNE1-202ENST00000352393 ARMC1Q9NVT9 282 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 DUS2Q9NX74 493 aaKnown RBP24.61■■□□□ 1.53
CPNE1-202ENST00000352393 MYRFQ9Y2G1 1151 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 CASTOR2A6NHX0 329 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 ZNF839A8K0R7 811 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 MSI1O43347 362 aaKnown RBP24.61■■□□□ 1.53
CPNE1-202ENST00000352393 TRMUO75648 421 aaKnown RBP24.61■■□□□ 1.53
CPNE1-202ENST00000352393 CDK4P11802 303 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 GPX3P22352 226 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 CCR1P32246 355 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 TMEM207Q6UWW9 146 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 OR2T34Q8NGX1 318 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 OR2T3Q8NH03 318 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 SCAMP5Q8TAC9 235 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 C19orf60Q96EN9 201 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 SLC39A3Q9BRY0 314 aa24.61■■□□□ 1.53
CPNE1-202ENST00000352393 FBRSL1Q9HCM7 1045 aaKnown RBP24.61■■□□□ 1.53
CPNE1-202ENST00000352393 MTF2Q9Y483 593 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-202ENST00000352393 PAPSS2O95340 614 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-202ENST00000352393 PEX11BO96011 259 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 BMP2P12643 396 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 HOXC8P31273 242 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 SLC26A3P40879 764 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 SERPINH1P50454 418 aaKnown RBP24.6■■□□□ 1.53
CPNE1-202ENST00000352393 NFKB2Q00653 900 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 PPP4R4Q6NUP7 873 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 ERMP1Q7Z2K6 904 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 RETREG3Q86VR2 466 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 LPPQ93052 612 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 RMND5BQ96G75 393 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-202ENST00000352393 ACBD6Q9BR61 282 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 GPATCH1Q9BRR8 931 aaKnown RBP24.6■■□□□ 1.53
CPNE1-202ENST00000352393 ALG9Q9H6U8 611 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 RNF181Q9P0P0 153 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 GMPR2Q9P2T1 348 aaKnown RBP24.6■■□□□ 1.53
CPNE1-202ENST00000352393 RSL24D1Q9UHA3 163 aaKnown RBP24.6■■□□□ 1.53
CPNE1-202ENST00000352393 VWA7Q9Y334 891 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 SQORQ9Y6N5 450 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 MYO16Q9Y6X6 1858 aa24.6■■□□□ 1.53
CPNE1-202ENST00000352393 BBIP1A8MTZ0 92 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 TIPRLO75663 272 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 MT-CO1P00395 513 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms