RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 RNF219Q5W0B1 726 aaPredicted RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 GPR65Q8IYL9 337 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 DNAJC1Q96KC8 554 aaKnown RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 GPAMQ9HCL2 828 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 NOP53Q9NZM5 478 aaKnown RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 MARCH4Q9P2E8 410 aaPredicted RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 L3MBTL1Q9Y468 752 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 ANAPC1Q9H1A4 1944 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 CCDC162PA2VCL2 907 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 CD3EAPO15446 510 aaKnown RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 EFCAB14O75071 495 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 CHRNGP07510 517 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 GLDCP23378 1020 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 MPSTP25325 297 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 PRDX6P30041 224 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 SCNN1BP51168 640 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 RAP1GDS1P52306 607 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 PFKPQ01813 784 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 ACAP2Q15057 778 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 PABPC1LQ4VXU2 614 aaKnown RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 SEL1L3Q68CR1 1132 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 PIWIL4Q7Z3Z4 852 aaKnown RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 SDCCAG8Q86SQ7 713 aaPredicted RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 ITIH5Q86UX2 942 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 RBM15BQ8NDT2 890 aaKnown RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 CFAP61Q8NHU2 1237 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 DIS3LQ8TF46 1054 aaKnown RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 WBP2Q969T9 261 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 UBXN10Q96LJ8 280 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 MCOLN1Q9GZU1 580 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 INSL5Q9Y5Q6 135 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 ACTL7AQ9Y615 435 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 ARL5AQ9Y689 179 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 OR51F1A6NGY5 319 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 CBX4O00257 560 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 CCL22O00626 93 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 WISP3O95389 354 aaPredicted RBP16.75■□□□□ 0.27
SAMM50-201ENST00000350028 F11P03951 625 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 CCDC166P0CW27 439 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 TFEBP19484 476 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 NCF2P19878 526 aaPredicted RBP16.75■□□□□ 0.27
SAMM50-201ENST00000350028 PSMA3P25788 255 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 RGRP47804 291 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 CXorf57Q6NSI4 855 aaKnown RBP16.75■□□□□ 0.27
SAMM50-201ENST00000350028 FAM117BQ6P1L5 589 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 C16orf59Q7L2K0 433 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 LSMEM2Q8N112 164 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 SPATA6LQ8N4H0 392 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 ENDOVQ8N8Q3 282 aaKnown RBP16.75■□□□□ 0.27
SAMM50-201ENST00000350028 OR4L1Q8NH43 312 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 CMTM5Q96DZ9 223 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 CNDP1Q96KN2 507 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 MUC3BQ9H195 1237 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 EBF2Q9HAK2 575 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 MRPL17Q9NRX2 175 aaKnown RBP16.75■□□□□ 0.27
SAMM50-201ENST00000350028 CATSPERZQ9NTU4 200 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 NLE1Q9NVX2 485 aaPredicted RBP16.75■□□□□ 0.27
SAMM50-201ENST00000350028 NCKIPSDQ9NZQ3 722 aa16.75■□□□□ 0.27
SAMM50-201ENST00000350028 NUMBP49757 651 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 DEFB103AP81534 67 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 SMAD3P84022 425 aaKnown RBP16.74■□□□□ 0.27
SAMM50-201ENST00000350028 MXRA7P84157 204 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 CREMQ03060 361 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 TAF1AQ15573 450 aaPredicted RBP16.74■□□□□ 0.27
SAMM50-201ENST00000350028 SLC9B1Q4ZJI4 515 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 TMEM150AQ86TG1 271 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 LDB1Q86U70 411 aaPredicted RBP16.74■□□□□ 0.27
SAMM50-201ENST00000350028 TXNDC5Q8NBS9 432 aaKnown RBP16.74■□□□□ 0.27
SAMM50-201ENST00000350028 OR13C4Q8NGS5 318 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 MAPK15Q8TD08 544 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 RMDN1Q96DB5 314 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 CDKN2AIPNLQ96HQ2 116 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 TDRD1Q9BXT4 1180 aaKnown RBP16.74■□□□□ 0.27
SAMM50-201ENST00000350028 SUDS3Q9H7L9 328 aaPredicted RBP16.74■□□□□ 0.27
SAMM50-201ENST00000350028 POPDC3Q9HBV1 291 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 TCF7L2Q9NQB0 619 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 PLA2G4CQ9UP65 541 aa16.74■□□□□ 0.27
SAMM50-201ENST00000350028 GRID2O43424 1007 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 GM2AP17900 193 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 FDXRP22570 491 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 PPM1AP35813 382 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 GJA8P48165 433 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ZNF140P52738 457 aaPredicted RBP16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ACAD11Q709F0 780 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 RNF135Q8IUD6 432 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 SLC22A9Q8IVM8 553 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 CCNYL1Q8N7R7 359 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 HJURPQ8NCD3 748 aaPredicted RBP16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ZFRQ96KR1 1074 aaKnown RBP16.73■□□□□ 0.27
SAMM50-201ENST00000350028 CCDC28BQ9BUN5 200 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 POMKQ9H5K3 350 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 DCLRE1BQ9H816 532 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 TRPC7Q9HCX4 862 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 INTS10Q9NVR2 710 aaKnown RBP16.73■□□□□ 0.27
SAMM50-201ENST00000350028 SMPD4Q9NXE4 827 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 STK39Q9UEW8 545 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ZDHHC2Q9UIJ5 367 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ASB3Q9Y575 518 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 PLXNA4Q9HCM2 1894 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms