RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CCR1P32246 355 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 STX5Q13190 355 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 IKBKEQ14164 716 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 AGAP9Q5VTM2 703 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 ALDOCP09972 364 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 UGT1A6P19224 532 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 SOX11P35716 441 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 SLC7A2P52569 658 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 RHDQ02161 417 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 C6orf10Q5SRN2 563 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 ISCA2Q86U28 154 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 IRGQQ8WZA9 623 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 PTERQ96BW5 349 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 RPL10LQ96L21 214 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 UBXN10Q96LJ8 280 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 PHF12Q96QT6 1004 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 EPB41L1Q9H4G0 881 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 UTP6Q9NYH9 597 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 CD300AQ9UGN4 299 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 DSEQ9UL01 958 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 HEATR9A2RTY3 570 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 MGEA5O60502 916 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 ZNF189O75820 626 aaPredicted RBP18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 ETFBP38117 255 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 GRIK1P39086 918 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 FOXA1P55317 472 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 CATSPER1Q8NEC5 780 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 MRPS26Q9BYN8 205 aaKnown RBP18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 CATSPERBQ9H7T0 1116 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 LIN28AQ9H9Z2 209 aaKnown RBP18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 CLEC11AQ9Y240 323 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 A0A1W2PQH9 124 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 NRP2O60462 931 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 PIRTP0C851 137 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 PSMC3P17980 439 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 LEPRP48357 1165 aaKnown RBP18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 SH3BP2P78314 561 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 ZNF33AQ06730 810 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 SQLEQ14534 574 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 PIK3R6Q5UE93 754 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 ZNF354CQ86Y25 554 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 TMEM126BQ8IUX1 230 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 SCN4BQ8IWT1 228 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 CANT1Q8WVQ1 401 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 PPWD1Q96BP3 646 aaKnown RBP18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 HMCESQ96FZ2 354 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 NSUN5Q96P11 429 aaKnown RBP18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 ACBD6Q9BR61 282 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 HSFX1Q9UBD0 423 aa18.16■□□□□ 0.5
PTP4A3-202ENST00000349124 ASLP04424 464 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 CHRM3P20309 590 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 RGS2P41220 211 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 POLD2P49005 469 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 SERPINH1P50454 418 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 ZNF135P52742 658 aaPredicted RBP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 CDH15P55291 814 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 MRPS6P82932 125 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 APOFQ13790 326 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 ALFQ53S48 1182 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 ARHGAP22Q7Z5H3 698 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 CILP2Q8IUL8 1156 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 CHERPQ8IWX8 916 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 RTL3Q8N8U3 475 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 DIS3LQ8TF46 1054 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 ZC3H15Q8WU90 426 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 KCNA7Q96RP8 456 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 PKMYT1Q99640 499 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 AP5M1Q9H0R1 490 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 CAAP1Q9H8G2 361 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 SPAG4Q9NPE6 437 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 SUCOQ9UBS9 1254 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 MYLKQ15746 1914 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 A0A1B0GTL3 188 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 TBX18O95935 607 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 C8BP07358 591 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 PRSS56P0CW18 603 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 GPR15P49685 360 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 PURAQ00577 322 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 FAM110CQ1W6H9 321 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 UNC50Q53HI1 259 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 LARP4Q71RC2 724 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 GPR152Q8TDT2 470 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 TBATAQ96M53 351 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 AKTIPQ9H8T0 292 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 NDUFA13Q9P0J0 144 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 EGFL7Q9UHF1 273 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 CROTQ9UKG9 612 aa18.15■□□□□ 0.5
PTP4A3-202ENST00000349124 ARHGEF37A1IGU5 675 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 FAM149AA5PLN7 773 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 CAPN15O75808 1086 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 S1PR4O95977 384 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 MMP2P08253 660 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 ODC1P11926 461 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 DNAJB1P25685 340 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 HOXC13P31276 330 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 SLC5A2P31639 672 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 GRIA3P42263 894 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 FSCN1Q16658 493 aaKnown RBP18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 VPS26BQ4G0F5 336 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms