RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 DNAL1Q4LDG9 190 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 SLC9B1Q4ZJI4 515 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 TECRLQ5HYJ1 363 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 CXorf57Q6NSI4 855 aaKnown RBP20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 MRNIPQ6NTE8 343 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 KLC3Q6P597 504 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 SPATA31D4Q6ZUB0 917 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 TMEM150AQ86TG1 271 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 LDB1Q86U70 411 aaPredicted RBP20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 PNPLA1Q8N8W4 532 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 FBXO27Q8NI29 283 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 MAPK15Q8TD08 544 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 TRIM43Q96BQ3 446 aaPredicted RBP20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 NSMCE3Q96MG7 304 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 UNKQ9C0B0 810 aaKnown RBP20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 EBF2Q9HAK2 575 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 TRPC7Q9HCX4 862 aa20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 NOP53Q9NZM5 478 aaKnown RBP20.44■□□□□ 0.86
CHRNA3-202ENST00000348639 CBX4O00257 560 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 HDAC3O15379 428 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CD3EAPO15446 510 aaKnown RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 NPHS1O60500 1241 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 SNUPNO95149 360 aaKnown RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 WISP3O95389 354 aaPredicted RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 LATS1O95835 1130 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 TIMP1P01033 207 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 TFEBP19484 476 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 SLC26A3P40879 764 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 EPHB3P54753 998 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 NSUN2Q08J23 767 aaKnown RBP eCLIP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 RNF219Q5W0B1 726 aaPredicted RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 FAM45BPQ6NSW5 357 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 C16orf59Q7L2K0 433 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 LSMEM2Q8N112 164 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 TXNDC5Q8NBS9 432 aaKnown RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 TTC16Q8NEE8 873 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 FAM45AQ8TCE6 357 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 AGR3Q8TD06 166 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 ZFRQ96KR1 1074 aaKnown RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CYP2S1Q96SQ9 504 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 C11orf49Q9H6J7 331 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 SCUBE2Q9NQ36 999 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 ACSS2Q9NR19 701 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 MRPL17Q9NRX2 175 aaKnown RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 WBP1LQ9NX94 342 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CORO1CQ9ULV4 474 aaPredicted RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 PLA2G4CQ9UP65 541 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CCDC162PA2VCL2 907 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CARNS1A5YM72 827 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 SLCO1B7G3V0H7 640 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 BUD23O43709 281 aaKnown RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 ENTPD5O75356 428 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CRTAMO95727 393 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 RBP1P09455 135 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 PIRTP0C851 137 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CCDC166P0CW27 439 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 MBL2P11226 248 aaPredicted RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 RAG1P15918 1043 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CCR10P46092 362 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 RAP1GDS1P52306 607 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CDKN2DP55273 166 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 PTPRCAPQ14761 206 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 ACAP2Q15057 778 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 FSCBQ5H9T9 825 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 SEL1L3Q68CR1 1132 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 ZNF783Q6ZMS7 281 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 OTOP2Q7RTS6 562 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 PIWIL4Q7Z3Z4 852 aaKnown RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 CMTR2Q8IYT2 770 aaKnown RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 OR13C4Q8NGS5 318 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 STON2Q8WXE9 905 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 MUC3BQ9H195 1237 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 NCKIPSDQ9NZQ3 722 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 VTI1BQ9UEU0 232 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 ZDHHC2Q9UIJ5 367 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 INSL5Q9Y5Q6 135 aa20.43■□□□□ 0.86
CHRNA3-202ENST00000348639 HOXB8P17481 243 aaPredicted RBP20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 NCF2P19878 526 aaPredicted RBP20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 SERPINB5P36952 375 aa20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 PFKPQ01813 784 aa20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 ENDOVQ8N8Q3 282 aaKnown RBP20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 CCDC126Q96EE4 140 aa20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 POMKQ9H5K3 350 aa20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 TCF7L2Q9NQB0 619 aa20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 MAN1C1Q9NR34 630 aa20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 NKX1-2Q9UD57 310 aaPredicted RBP20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 MAFFQ9ULX9 164 aa20.42■□□□□ 0.86
CHRNA3-202ENST00000348639 LTBP2Q14767 1821 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 ANAPC1Q9H1A4 1944 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 TEX28O15482 410 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 ANP32DO95626 131 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 C1RP00736 705 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 LMNAP02545 664 aaKnown RBP20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 F11P03951 625 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 OGNP20774 298 aaKnown RBP20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 SMAD3P84022 425 aaKnown RBP20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 RNF135Q8IUD6 432 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 CCNYL1Q8N7R7 359 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 OR4L1Q8NH43 312 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms