RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 INHBCP55103 352 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 PDAP1Q13442 181 aaKnown RBP14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 ALFQ53S48 1182 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 CLEC6AQ6EIG7 209 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 C8orf82Q6P1X6 216 aaPredicted RBP14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 SPATA24Q86W54 205 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 OR9I1Q8NGQ6 314 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 CNBD2Q96M20 576 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 TRIM62Q9BVG3 475 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 POLR3BQ9NW08 1133 aaPredicted RBP14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 ADA2Q9NZK5 511 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 A0A1B0GTW7 788 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 PRORSD1PA6NEY8 169 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 ZNF623O75123 536 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 S1PR4O95977 384 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 GRIK1P39086 918 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 SERPINH1P50454 418 aaKnown RBP14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 SQLEQ14534 574 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 PSMD5Q16401 504 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 GALNT4Q8N4A0 578 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 SLC39A13Q96H72 371 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 C3orf30Q96M34 536 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 SYT17Q9BSW7 474 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 FBRSL1Q9HCM7 1045 aaKnown RBP14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 SUCOQ9UBS9 1254 aaKnown RBP14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 VILLO15195 856 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 MT-CO1P00395 513 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 ZNF26P17031 533 aaPredicted RBP14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 FASTKQ14296 549 aaKnown RBP14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 AGKQ53H12 422 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 C6orf10Q5SRN2 563 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 GPR158Q5T848 1215 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 AGAP9Q5VTM2 703 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 UMODL1-AS1Q8N2C9 162 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 TADA1Q96BN2 335 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 PTERQ96BW5 349 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 SUSD3Q96L08 255 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 PPP1R2P1Q96PQ5 205 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 MRPL1Q9BYD6 325 aaKnown RBP14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 EPB41L1Q9H4G0 881 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 CCDC167Q9P0B6 97 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 CD300AQ9UGN4 299 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 SLC4A7Q9Y6M7 1214 aa14.6□□□□□ -0.07
ARHGEF1-202ENST00000347545 PSMD12O00232 456 aaPredicted RBP14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 ATXN1LP0C7T5 689 aaKnown RBP14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 KPNA2P52292 529 aaKnown RBP14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 LSAMPQ13449 338 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 MGAT5BQ3V5L5 792 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 GREB1Q4ZG55 1949 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 SIRPB2Q5JXA9 342 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 ARHGAP22Q7Z5H3 698 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 ISCA2Q86U28 154 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 SPATA2LQ8IUW3 424 aaPredicted RBP14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 DRAXINQ8NBI3 349 aaPredicted RBP14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 FAM110BQ8TC76 370 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 MTG1Q9BT17 334 aaPredicted RBP14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 UNC93B1Q9H1C4 597 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 ALG9Q9H6U8 611 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 VPS45Q9NRW7 570 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 APPL1Q9UKG1 709 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 LZTS1Q9Y250 596 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 C7orf72A4D263 438 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 UBDO15205 165 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 ALDOCP09972 364 aaKnown RBP14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 CTGFP29279 349 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 TUSC3Q13454 348 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 TRIM25Q14258 630 aaKnown RBP14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 ACAP2Q15057 778 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 UGT3A2Q3SY77 523 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 UNC50Q53HI1 259 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 GNASQ5JWF2 1037 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 ZNF549Q6P9A3 640 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 ARRDC2Q8TBH0 407 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 PIP4K2CQ8TBX8 421 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 DSEQ9UL01 958 aa14.59□□□□□ -0.07
ARHGEF1-202ENST00000347545 GPR182O15218 404 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 USP46P62068 366 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 CREB5Q02930 508 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 CACNB2Q08289 660 aaPredicted RBP14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 PTPRCAPQ14761 206 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 MS4A13Q5J8X5 152 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 ZNF678Q5SXM1 525 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 LARP4Q71RC2 724 aaKnown RBP eCLIP14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 FUNDC1Q8IVP5 155 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 HDAC10Q969S8 669 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 PSMG2Q969U7 264 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 FAR2Q96K12 515 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 C1orf74Q96LT6 269 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 RBM38Q9H0Z9 239 aaKnown RBP14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 VWA7Q9Y334 891 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 TRAF6Q9Y4K3 522 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 PTGDR2Q9Y5Y4 395 aa14.58□□□□□ -0.07
ARHGEF1-202ENST00000347545 ATP6AP2A0A1C7CYW4 349 aa14.58□□□□□ -0.08
ARHGEF1-202ENST00000347545 PPP6CO00743 305 aa14.58□□□□□ -0.08
ARHGEF1-202ENST00000347545 LDB2O43679 373 aa14.58□□□□□ -0.08
ARHGEF1-202ENST00000347545 ATP6AP2O75787 350 aa14.58□□□□□ -0.08
ARHGEF1-202ENST00000347545 PAPSS2O95340 614 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF1-202ENST00000347545 IMPDH1P20839 514 aa14.58□□□□□ -0.08
ARHGEF1-202ENST00000347545 APOFQ13790 326 aa14.58□□□□□ -0.08
ARHGEF1-202ENST00000347545 SEMA3AQ14563 771 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms