RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 BLOC1S5Q8TDH9 187 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 SORCS1Q8WY21 1168 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 HDAC10Q969S8 669 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 ALKBH8Q96BT7 664 aaKnown RBP11.03□□□□□ -0.64
ECM1-201ENST00000346569 ECHDC3Q96DC8 303 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 TBATAQ96M53 351 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 NECTIN4Q96NY8 510 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 TUBGCP5Q96RT8 1024 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 CAPS2Q9BXY5 557 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 SUV39H2Q9H5I1 410 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 ATP13A3Q9H7F0 1226 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 IARS2Q9NSE4 1012 aaKnown RBP11.03□□□□□ -0.64
ECM1-201ENST00000346569 NLE1Q9NVX2 485 aaPredicted RBP11.03□□□□□ -0.64
ECM1-201ENST00000346569 NSMCE4AQ9NXX6 385 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 ARL5AQ9Y689 179 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 KIF26AQ9ULI4 1882 aaPredicted RBP11.03□□□□□ -0.64
ECM1-201ENST00000346569 TMEM120BA0PK00 339 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 TTC34A8MYJ7 566 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 ANHXE9PGG2 379 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 PIGNO95427 931 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 CRTAMO95727 393 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 ITGA2BP08514 1039 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 CHN1P15882 459 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 KRT4P19013 534 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 IGFBP4P22692 258 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 SPRP35270 261 aaPredicted RBP11.02□□□□□ -0.64
ECM1-201ENST00000346569 EIF2DP41214 584 aaKnown RBP11.02□□□□□ -0.64
ECM1-201ENST00000346569 CCNHP51946 323 aaPredicted RBP11.02□□□□□ -0.64
ECM1-201ENST00000346569 ZNF140P52738 457 aaPredicted RBP11.02□□□□□ -0.64
ECM1-201ENST00000346569 GUCY1A3Q02108 690 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 GABPB1Q06547 395 aaPredicted RBP11.02□□□□□ -0.64
ECM1-201ENST00000346569 GRM2Q14416 872 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 PTPRCAPQ14761 206 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 GRM3Q14832 879 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 PTPRRQ15256 657 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 TERF2Q15554 542 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 CDKN3Q16667 212 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 ACCSLQ4AC99 568 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 MROH9Q5TGP6 573 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 GRAMD4Q6IC98 578 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 STRA8Q7Z7C7 330 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 GALNT7Q86SF2 657 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 YAF2Q8IY57 180 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 C4orf33Q8N1A6 199 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 MICALL1Q8N3F8 863 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 CPA6Q8N4T0 437 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 CHST14Q8NCH0 376 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 C2CD4AQ8NCU7 369 aaPredicted RBP11.02□□□□□ -0.64
ECM1-201ENST00000346569 OR13C4Q8NGS5 318 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 OR6K2Q8NGY2 324 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 CYB5D2Q8WUJ1 264 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 PTPRN2Q92932 1015 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 NXPE3Q969Y0 559 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 ISL2Q96A47 359 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 EID2BQ96D98 161 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 CDKN2AIPNLQ96HQ2 116 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 SGSM3Q96HU1 749 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 DNAJC1Q96KC8 554 aaKnown RBP11.02□□□□□ -0.64
ECM1-201ENST00000346569 ZNF641Q96N77 438 aaPredicted RBP11.02□□□□□ -0.64
ECM1-201ENST00000346569 SMC6Q96SB8 1091 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 RBBP8Q99708 897 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 C19orf43Q9BQ61 176 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 KXD1Q9BQD3 176 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 TRMT61BQ9BVS5 477 aaKnown RBP11.02□□□□□ -0.64
ECM1-201ENST00000346569 MFSD1Q9H3U5 465 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 KCNK9Q9NPC2 374 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 GTSE1Q9NYZ3 720 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 HACD3Q9P035 362 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 GGT7Q9UJ14 662 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 MIA3Q5JRA6 1907 aa11.02□□□□□ -0.64
ECM1-201ENST00000346569 A0A0J9YYE9 177 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 C2orf81A6NN90 581 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 BUD23O43709 281 aaKnown RBP11.01□□□□□ -0.65
ECM1-201ENST00000346569 SPAG7O75391 227 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 TRBC1P01850 177 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 PYGBP11216 843 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 LPOP22079 712 aaPredicted RBP11.01□□□□□ -0.65
ECM1-201ENST00000346569 SERPINA4P29622 427 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 GDI1P31150 447 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 NNMTP40261 264 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 CCNFP41002 786 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 ABL2P42684 1182 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 MAGEA12P43365 314 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 GRIA4P48058 902 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 CSRP3P50461 194 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 LIMK2P53671 638 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 RAD51Q06609 339 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 CTBP1Q13363 440 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 BMPR2Q13873 1038 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 EIF4HQ15056 248 aaKnown RBP11.01□□□□□ -0.65
ECM1-201ENST00000346569 NAIF1Q69YI7 327 aaPredicted RBP11.01□□□□□ -0.65
ECM1-201ENST00000346569 FSTL4Q6MZW2 842 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 EP400NLQ6ZTU2 488 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 KIAA0408Q6ZU52 694 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 Q6ZVU0 165 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 MICALCLQ6ZW33 695 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 ZC3HC1Q86WB0 502 aaKnown RBP11.01□□□□□ -0.65
ECM1-201ENST00000346569 ZSWIM9Q86XI8 627 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 DENND6AQ8IWF6 608 aa11.01□□□□□ -0.65
ECM1-201ENST00000346569 LMNTD2Q8IXW0 634 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms