RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 HSFY1Q96LI6 401 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 PHF12Q96QT6 1004 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 TRPC4Q9UBN4 977 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 PMF1-BGLAPU3KQ54 211 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 PLOD3O60568 738 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 LIMK2P53671 638 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 RHOAP61586 193 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ELP6Q0PNE2 266 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 SDCBP2Q9H190 292 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 KPNA1P52294 538 aaPredicted RBP18.13■□□□□ 0.49
SMC4-201ENST00000344722 MOGQ16653 247 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ZNF671Q8TAW3 534 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ZNF99A8MXY4 864 aaPredicted RBP18.13■□□□□ 0.49
SMC4-201ENST00000344722 RGS20O76081 388 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 CTSHP09668 335 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 DGKAP23743 735 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ST8SIA6P61647 398 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 RPL38P63173 70 aaKnown RBP18.13■□□□□ 0.49
SMC4-201ENST00000344722 PPM1JQ5JR12 505 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 POTEHQ6S545 545 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 GLB1LQ6UWU2 654 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 DENND6AQ8IWF6 608 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 NACC2Q96BF6 587 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 TMCO6Q96DC7 493 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 SMARCD1Q96GM5 515 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ITCHQ96J02 903 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 SLITRK2Q9H156 845 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 TOR4AQ9NXH8 423 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 OR12D3Q9UGF7 316 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 SNX6Q9UNH7 406 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 BAZ2BQ9UIF8 2168 aaKnown RBP18.13■□□□□ 0.49
SMC4-201ENST00000344722 NFAT5O94916 1531 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 NOS1APO75052 506 aaPredicted RBP18.13■□□□□ 0.49
SMC4-201ENST00000344722 KLHL18O94889 574 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ITGB6P18564 788 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 AKR1D1P51857 326 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 LIPEQ05469 1076 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ACSM2AQ08AH3 577 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 CA9Q16790 459 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 EML3Q32P44 896 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ACSM2BQ68CK6 577 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ALG2Q9H553 416 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ARMC7Q9H6L4 198 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 SNTG2Q9NY99 539 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 PHC1P78364 1004 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 NDUFAF6Q330K2 333 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 PMF1Q6P1K2 205 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 SERPINB11Q96P15 392 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 KAT8Q9H7Z6 458 aaKnown RBP18.12■□□□□ 0.49
SMC4-201ENST00000344722 SLC22A1O15245 554 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 AIREO43918 545 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 CDYL2Q8N8U2 506 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 SELENOMQ8WWX9 145 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 P2RY11Q96G91 374 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 CHRNB2P17787 502 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 PTSQ03393 145 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 SHROOM1Q2M3G4 852 aaPredicted RBP18.12■□□□□ 0.49
SMC4-201ENST00000344722 TNFAIP8L3Q5GJ75 292 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 PPM1LQ5SGD2 360 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 ZCCHC8Q6NZY4 707 aaKnown RBP18.12■□□□□ 0.49
SMC4-201ENST00000344722 ULK1O75385 1050 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 TGFB3P10600 412 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 AOC1P19801 751 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 CRATP43155 626 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 SH3BP5LQ7L8J4 393 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 ASB9Q96DX5 294 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 POLR1EQ9GZS1 481 aaKnown RBP18.12■□□□□ 0.49
SMC4-201ENST00000344722 MAGEE1Q9HCI5 957 aa18.12■□□□□ 0.49
SMC4-201ENST00000344722 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.12■□□□□ 0.49
SMC4-201ENST00000344722 FAM240BA0A1B0GVZ2 78 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 SLC12A8A0AV02 714 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 OTCP00480 354 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 NR4A1P22736 598 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 POLR2JP52435 117 aaKnown RBP18.11■□□□□ 0.49
SMC4-201ENST00000344722 PRKCQQ04759 706 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 SH3D19Q5HYK7 790 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 TFAP2DQ7Z6R9 452 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 TMEM126BQ8IUX1 230 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 SLC4A11Q8NBS3 891 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 LRRN4Q8WUT4 740 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 EMILIN2Q9BXX0 1053 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 OGDHLQ9ULD0 1010 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 CNOT6Q9ULM6 557 aaKnown RBP18.11■□□□□ 0.49
SMC4-201ENST00000344722 PCDHGA10Q9Y5H3 936 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 CENPAP49450 140 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 IST1P53990 364 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 SFT2D3Q587I9 215 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 TMEM110Q86TL2 294 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 LRRC49Q8IUZ0 686 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 OR5B17Q8NGF7 314 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 GTF3C2Q8WUA4 911 aaPredicted RBP18.11■□□□□ 0.49
SMC4-201ENST00000344722 EHD1Q9H4M9 534 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 INTS10Q9NVR2 710 aaKnown RBP18.11■□□□□ 0.49
SMC4-201ENST00000344722 VWA7Q9Y334 891 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 SH3BP1Q9Y3L3 701 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 DISP2A7MBM2 1401 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 PREX1Q8TCU6 1659 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 H3BMM5 538 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 DPYSL4O14531 572 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 B3GAT3O94766 335 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms