RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 A8MX80 341 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 SERPING1P05155 500 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 MPOP05164 745 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 PCCBP05166 539 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 C6P13671 934 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 RGRP47804 291 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 LIG3P49916 1009 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 ZNF135P52742 658 aaPredicted RBP12.5□□□□□ -0.41
SGCA-202ENST00000344627 ADKP55263 362 aaKnown RBP12.5□□□□□ -0.41
SGCA-202ENST00000344627 SKOR1P84550 965 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 ZBED6P86452 979 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 PPARDQ03181 441 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 IL10RBQ08334 325 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 EIF2B5Q13144 721 aaKnown RBP12.5□□□□□ -0.41
SGCA-202ENST00000344627 KRT81Q14533 505 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 ZNF235Q14590 738 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 AGERQ15109 404 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 CDKN3Q16667 212 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 BOLA3Q53S33 107 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 TMCO3Q6UWJ1 677 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 ENPP7Q6UWV6 458 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 RD3Q7Z3Z2 195 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 HID1Q8IV36 788 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 PHACTR4Q8IZ21 702 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 RBFAQ8N0V3 343 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 LZTR1Q8N653 840 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 NSMCE1Q8WV22 266 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 VOPP1Q96AW1 172 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 TMEM159Q96B96 161 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 TUBGCP5Q96RT8 1024 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 THAP2Q9H0W7 228 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 TCEAL2Q9H3H9 227 aaPredicted RBP12.5□□□□□ -0.41
SGCA-202ENST00000344627 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.5□□□□□ -0.41
SGCA-202ENST00000344627 KCTD5Q9NXV2 234 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 IFNKQ9P0W0 207 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 SEPT3Q9UH03 358 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 ANAPC7Q9UJX3 599 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 ATP8A1Q9Y2Q0 1164 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 LUC7L2Q9Y383 392 aaKnown RBP12.5□□□□□ -0.41
SGCA-202ENST00000344627 RP1P56715 2156 aa12.5□□□□□ -0.41
SGCA-202ENST00000344627 CCDC187A0A096LP49 1063 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 A0A1W2PQJ5 194 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 ITGA2BP08514 1039 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 CTSEP14091 401 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 TCF4P15884 667 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 IL1R2P27930 398 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 PCK1P35558 622 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 CSNK1DP48730 415 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 HCAR3P49019 387 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 RENBPP51606 427 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 POLR2LP62875 67 aaKnown RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 DPYSQ14117 519 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 SPIDRQ14159 915 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 PIGHQ14442 188 aaPredicted RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 RFTN1Q14699 578 aaPredicted RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 LBRQ14739 615 aaKnown RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 WSCD2Q2TBF2 565 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 CCDC122Q5T0U0 273 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 AFMIDQ63HM1 303 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 CYP4V2Q6ZWL3 525 aaPredicted RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 CLEC14AQ86T13 490 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 GKN2Q86XP6 184 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 TP53INP2Q8IXH6 220 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 NPWQ8N729 165 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 ARL10Q8N8L6 244 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 TP53I13Q8NBR0 393 aaPredicted RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 PDCD6IPQ8WUM4 868 aaKnown RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 SYN2Q92777 582 aaPredicted RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 TSACCQ96A04 125 aaPredicted RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 LIN37Q96GY3 246 aaPredicted RBP12.49□□□□□ -0.41
SGCA-202ENST00000344627 NUP85Q9BW27 656 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 STRADBQ9C0K7 418 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 SYNDIG1Q9H7V2 258 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 GULP1Q9UBP9 304 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 IP6K2Q9UHH9 426 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 CAPN11Q9UMQ6 739 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 OR1A2Q9Y585 309 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 ENTPD2Q9Y5L3 495 aa12.49□□□□□ -0.41
SGCA-202ENST00000344627 A0A1W2PQ67 120 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 TTC24A2A3L6 582 aaPredicted RBP12.48□□□□□ -0.41
SGCA-202ENST00000344627 CDRT15L2A8MXV6 281 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 K7ENP7 123 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 MYO1FO00160 1098 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 MUSKO15146 869 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 KLK10O43240 276 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 ZW10O43264 779 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 GCATO75600 419 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 C1QL1O75973 258 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 RASGRP1O95267 797 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 TPM3P06753 285 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 RARAP10276 462 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 PNLIPP16233 465 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 PTMSP20962 102 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 TGM2P21980 687 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 KELP23276 732 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 GJC1P36383 396 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 MMP12P39900 470 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 NSUN2Q08J23 767 aaKnown RBP eCLIP12.48□□□□□ -0.41
SGCA-202ENST00000344627 INPP5AQ14642 412 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms