RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TAS2R1Q9NYW7 299 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 NKX1-2Q9UD57 310 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 VPS28Q9UK41 221 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 APOA4P06727 396 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 ADH1AP07327 375 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 CRABP2P29373 138 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 HTRA4P83105 476 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 POU4F1Q01851 419 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 LAMB3Q13751 1172 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 CENPLQ8N0S6 344 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 BRSK1Q8TDC3 778 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 SREK1Q8WXA9 508 aaKnown RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 TBATAQ96M53 351 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 NUDCD1Q96RS6 583 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 OMDQ99983 421 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 CXXC1Q9P0U4 656 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 COLQQ9Y215 455 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 DIAPH2O60879 1101 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 TMCC1O94876 653 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 LUC7L3O95232 432 aaKnown RBP18.68■□□□□ 0.58
HOXA9-201ENST00000343483 GJA1P17302 382 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 CR2P20023 1033 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 CPA2P48052 419 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 LEPRP48357 1165 aaKnown RBP18.68■□□□□ 0.58
HOXA9-201ENST00000343483 ABCE1P61221 599 aaKnown RBP18.68■□□□□ 0.58
HOXA9-201ENST00000343483 Q6ZNB5 142 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 CCDC149Q6ZUS6 474 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 TEX9Q8N6V9 391 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 TTC8Q8TAM2 541 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 GDF15Q99988 308 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 TCF25Q9BQ70 676 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 UNKQ9C0B0 810 aaKnown RBP18.68■□□□□ 0.58
HOXA9-201ENST00000343483 MARCH4Q9P2E8 410 aaPredicted RBP18.68■□□□□ 0.58
HOXA9-201ENST00000343483 LSM7Q9UK45 103 aaKnown RBP18.68■□□□□ 0.58
HOXA9-201ENST00000343483 INSL6Q9Y581 213 aa18.68■□□□□ 0.58
HOXA9-201ENST00000343483 A0A1W2PRU2 124 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 ENTPD5O75356 428 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 SERPINA6P08185 405 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 COL6A2P12110 1019 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 ARRB2P32121 409 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 RCN2Q14257 317 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 PRPF38BQ5VTL8 546 aaKnown RBP18.67■□□□□ 0.58
HOXA9-201ENST00000343483 ZNF783Q6ZMS7 281 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 LCA5Q86VQ0 697 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 TMC8Q8IU68 726 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 ELMOD1Q8N336 334 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 KREMEN2Q8NCW0 462 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 OR13C4Q8NGS5 318 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 CLP1Q92989 425 aaKnown RBP18.67■□□□□ 0.58
HOXA9-201ENST00000343483 SORT1Q99523 831 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 FEM1AQ9BSK4 669 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 CFAP97Q9P2B7 532 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 MID2Q9UJV3 735 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 PCDHGC4Q9Y5F7 938 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 KIAA1671Q9BY89 1806 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 ANAPC1Q9H1A4 1944 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.67■□□□□ 0.58
HOXA9-201ENST00000343483 SLC4A1P02730 911 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 CLCN5P51795 746 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 SLC14A2Q15849 920 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 LRRC8EQ6NSJ5 796 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 LILRA6Q6PI73 481 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 NAPRTQ6XQN6 538 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 ATG14Q6ZNE5 492 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 FSTL5Q8N475 847 aaPredicted RBP18.67■□□□□ 0.58
HOXA9-201ENST00000343483 WFDC5Q8TCV5 224 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 DDI1Q8WTU0 396 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 NXNL1Q96CM4 212 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 CORO1BQ9BR76 489 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 TACO1Q9BSH4 297 aaKnown RBP18.67■□□□□ 0.58
HOXA9-201ENST00000343483 CCDC106Q9BWC9 280 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 TDRD1Q9BXT4 1180 aaKnown RBP18.67■□□□□ 0.58
HOXA9-201ENST00000343483 TAGLN3Q9UI15 199 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 SH3BP1Q9Y3L3 701 aa18.67■□□□□ 0.58
HOXA9-201ENST00000343483 CHD5Q8TDI0 1954 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 A0A087X1B8 175 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 B2RBV5 119 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 TRIM13O60858 407 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 CD160O95971 181 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 GOT2P00505 430 aaKnown RBP18.66■□□□□ 0.58
HOXA9-201ENST00000343483 MYL4P12829 197 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 CSKP41240 450 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 PPIGQ13427 754 aaKnown RBP eCLIP18.66■□□□□ 0.58
HOXA9-201ENST00000343483 TBCCQ15814 346 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 ZYG11AQ6WRX3 759 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 MFN1Q8IWA4 741 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 LPCAT1Q8NF37 534 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 RDH11Q8TC12 318 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 PDCD6IPQ8WUM4 868 aaKnown RBP18.66■□□□□ 0.58
HOXA9-201ENST00000343483 GCNAQ96QF7 691 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 OLFM1Q99784 485 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 LRRC3Q9BY71 257 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 STN1Q9H668 368 aaKnown RBP18.66■□□□□ 0.58
HOXA9-201ENST00000343483 PNPOQ9NVS9 261 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 OXSMQ9NWU1 459 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 XPR1Q9UBH6 696 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 ARIH1Q9Y4X5 557 aaPredicted RBP18.66■□□□□ 0.58
HOXA9-201ENST00000343483 SPO11Q9Y5K1 396 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 RAI2Q9Y5P3 530 aa18.66■□□□□ 0.58
HOXA9-201ENST00000343483 CCDC162PA2VCL2 907 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms