RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 MMP12P39900 470 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 RBM43Q6ZSC3 357 aaKnown RBP13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 RAB11FIP2Q7L804 512 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 TAF8Q7Z7C8 310 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 CLEC14AQ86T13 490 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 LZTR1Q8N653 840 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 SNRNP27Q8WVK2 155 aaKnown RBP13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 CCDC74AQ96AQ1 378 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 PRR11Q96HE9 360 aaPredicted RBP13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 CELF6Q96J87 481 aaKnown RBP13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 GBP4Q96PP9 640 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 SLC39A8Q9C0K1 460 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 PDFQ9HBH1 243 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 EPB41L5Q9HCM4 733 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 WDR70Q9NW82 654 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 OR1A2Q9Y585 309 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 DGKBQ9Y6T7 804 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 TENM4Q6N022 2769 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 KALRNO60229 2985 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 COL6A6A6NMZ7 2263 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 LRP4O75096 1905 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 A0A1W2PQ67 120 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 K7ENP7 123 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 TNFRSF10CO14798 259 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 ZW10O43264 779 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 HOXC4P09017 264 aaPredicted RBP13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 GLB1P16278 677 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 INHBCP55103 352 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 CCL7P80098 99 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 SKOR1P84550 965 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 IL10RBQ08334 325 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 MAMLD1Q13495 774 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 ARHGEF7Q14155 803 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 TSR1Q2NL82 804 aaKnown RBP13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 ZSCAN23Q3MJ62 389 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 TMCO4Q5TGY1 634 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 INO80CQ6PI98 192 aaPredicted RBP13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 PSTKQ8IV42 348 aaKnown RBP13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 KYQ8NBH2 561 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 TSEN2Q8NCE0 465 aaKnown RBP13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 FAM46DQ8NEK8 389 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 OR56A4Q8NGH8 313 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 TMEM159Q96B96 161 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 RBM15Q96T37 977 aaKnown RBP eCLIP13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 NAT10Q9H0A0 1025 aaKnown RBP13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 LRRN3Q9H3W5 708 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 PCSK1NQ9UHG2 260 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 ARHGEF17Q96PE2 2063 aaPredicted RBP13.13□□□□□ -0.31
NECTIN1-203ENST00000341398 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 A0A1W2PNU3 283 aaPredicted RBP13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 TMCO5BA8MYB1 307 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 DFFAO00273 331 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 RECQL5O94762 991 aaPredicted RBP13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 RPLP0P05388 317 aaKnown RBP13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 CELA2BP08218 269 aaPredicted RBP13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 JMJD7P0C870 316 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 PLA2G2AP14555 144 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 PNLIPP16233 465 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 ERCC2P18074 760 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 HCAR3P49019 387 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 SCNN1BP51168 640 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 KIAA1024LP59773 190 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 AP1S1P61966 158 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 TCEA2Q15560 299 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 PPP6R3Q5H9R7 873 aaPredicted RBP13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 PLEKHA7Q6IQ23 1121 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 LIPIQ6XZB0 460 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 RFX8Q6ZV50 586 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 IRF2BP2Q7Z5L9 587 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 JAMLQ86YT9 394 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 BBS5Q8N3I7 341 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 CCNL2Q96S94 520 aaPredicted RBP13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 ZWILCHQ9H900 591 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 GPATCH2LQ9NWQ4 482 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 SEPT10Q9P0V9 454 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 SEPT3Q9UH03 358 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 MOSPD1Q9UJG1 213 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 APPL1Q9UKG1 709 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 PCDHGA7Q9Y5G6 932 aa13.12□□□□□ -0.31
NECTIN1-203ENST00000341398 D6RAR5 112 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 GZMAP12544 262 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 SLC5A2P31639 672 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 CCKBRP32239 447 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 UGT1A5P35504 534 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 TRIM23P36406 574 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 OGDHQ02218 1023 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 PEX6Q13608 980 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 ACOX1Q15067 660 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 FILIP1LQ4L180 1135 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 AFMIDQ63HM1 303 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 OGFOD3Q6PK18 319 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 PCSK4Q6UW60 755 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 DPPA4Q7L190 304 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 CCNJLQ8IV13 435 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 GPR156Q8NFN8 814 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 KIAA1524Q8TCG1 905 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 FNIP1Q8TF40 1166 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 NSMCE1Q8WV22 266 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 ECHDC3Q96DC8 303 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms