RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 OLA1Q9NTK5 396 aaKnown RBP20.22■□□□□ 0.83
SPG7-202ENST00000341316 ARHGAP26Q9UNA1 814 aa20.22■□□□□ 0.83
SPG7-202ENST00000341316 ACTL7AQ9Y615 435 aa20.22■□□□□ 0.83
SPG7-202ENST00000341316 TBC1D4O60343 1298 aa20.21■□□□□ 0.83
SPG7-202ENST00000341316 PAPSS2O95340 614 aaPredicted RBP20.21■□□□□ 0.83
SPG7-202ENST00000341316 HNRNPLP14866 589 aaKnown RBP eCLIP20.21■□□□□ 0.83
SPG7-202ENST00000341316 HECTD2Q5U5R9 776 aa20.21■□□□□ 0.83
SPG7-202ENST00000341316 OR6P1Q8NGX9 317 aa20.21■□□□□ 0.83
SPG7-202ENST00000341316 CNDP1Q96KN2 507 aa20.21■□□□□ 0.83
SPG7-202ENST00000341316 SEMA3CQ99985 751 aa20.21■□□□□ 0.83
SPG7-202ENST00000341316 CCDC28BQ9BUN5 200 aa20.21■□□□□ 0.83
SPG7-202ENST00000341316 VCX3BQ9H321 246 aa20.21■□□□□ 0.83
SPG7-202ENST00000341316 SUDS3Q9H7L9 328 aaPredicted RBP20.21■□□□□ 0.83
SPG7-202ENST00000341316 CYP4F12Q9HCS2 524 aa20.21■□□□□ 0.83
SPG7-202ENST00000341316 PCDHB7Q9Y5E2 793 aa20.21■□□□□ 0.83
SPG7-202ENST00000341316 CCDC166P0CW27 439 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 UQCRBP14927 111 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 RAG1P15918 1043 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 ATP5F1P24539 256 aaPredicted RBP20.2■□□□□ 0.82
SPG7-202ENST00000341316 GSTT1P30711 240 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 CLCN5P51795 746 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 CDKN2DP55273 166 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 CNPY1Q3B7I2 92 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 PARP15Q460N3 678 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 FAM219BQ5XKK7 198 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 FUT10Q6P4F1 479 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 TMEM207Q6UWW9 146 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 FBXW8Q8N3Y1 598 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 CALML6Q8TD86 181 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 CATSPER2Q96P56 530 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 RTKNQ9BST9 563 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 TNFRSF12AQ9NP84 129 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 MKI67P46013 3256 aaKnown RBP20.2■□□□□ 0.82
SPG7-202ENST00000341316 NPHS1O60500 1241 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 TLR5O60602 858 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 S1PR4O95977 384 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 ALDH2P05091 517 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 HK2P52789 917 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 MED21Q13503 144 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 TRIP10Q15642 601 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 LIN52Q52LA3 116 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 SNX32Q86XE0 403 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 ST13P4Q8IZP2 240 aaPredicted RBP20.2■□□□□ 0.82
SPG7-202ENST00000341316 PDCD6IPQ8WUM4 868 aaKnown RBP20.2■□□□□ 0.82
SPG7-202ENST00000341316 BCL7CQ8WUZ0 217 aaPredicted RBP20.2■□□□□ 0.82
SPG7-202ENST00000341316 SPATA17Q96L03 361 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 UBXN10Q96LJ8 280 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 VTI1BQ9UEU0 232 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 PACSIN3Q9UKS6 424 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 CDYLQ9Y232 598 aa20.2■□□□□ 0.82
SPG7-202ENST00000341316 LAMA2P24043 3122 aaKnown RBP20.19■□□□□ 0.82
SPG7-202ENST00000341316 A0A0D9SEW6 157 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 SLC7A4O43246 635 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 ZDHHC11BP0C7U3 371 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 SELPP16109 830 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 ATF6P18850 670 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 TACR2P21452 398 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 SLC6A4P31645 630 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 DNAJB13P59910 316 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 PFKPQ01813 784 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 SH2D4BQ5SQS7 431 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 PRSS55Q6UWB4 352 aaPredicted RBP20.19■□□□□ 0.82
SPG7-202ENST00000341316 CPSF7Q8N684 471 aaKnown RBP20.19■□□□□ 0.82
SPG7-202ENST00000341316 OR52K2Q8NGK3 314 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 SPPL2BQ8TCT7 592 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 SPATA16Q9BXB7 569 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 MFSD1Q9H3U5 465 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 ARL5AQ9Y689 179 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 TET1Q8NFU7 2136 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 A8MT66 165 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 AIM2O14862 343 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 ADAM12O43184 909 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 PRAMEF11O60813 436 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 ARSAP15289 507 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 PLK1P53350 603 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 SLC14A2Q15849 920 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 FAM83EQ2M2I3 478 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 NXNQ6DKJ4 435 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 PIM3Q86V86 326 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 TBATAQ96M53 351 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 CENPKQ9BS16 269 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 TSEN34Q9BSV6 310 aaKnown RBP20.19■□□□□ 0.82
SPG7-202ENST00000341316 ELAC1Q9H777 363 aaKnown RBP20.19■□□□□ 0.82
SPG7-202ENST00000341316 PDFQ9HBH1 243 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 NCKIPSDQ9NZQ3 722 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 VWA7Q9Y334 891 aa20.19■□□□□ 0.82
SPG7-202ENST00000341316 RGSL1A5PLK6 1076 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 H3BNX3 289 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 WISP3O95389 354 aaPredicted RBP20.18■□□□□ 0.82
SPG7-202ENST00000341316 LTA4HP09960 611 aaKnown RBP20.18■□□□□ 0.82
SPG7-202ENST00000341316 PIRTP0C851 137 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 COL6A1P12109 1028 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 KCNC1P48547 511 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 RING1Q06587 406 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 GALNT3Q14435 633 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 ARMC3Q5W041 872 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 PIWIL4Q7Z3Z4 852 aaKnown RBP20.18■□□□□ 0.82
SPG7-202ENST00000341316 LGI2Q8N0V4 545 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 CRYL1Q9Y2S2 319 aa20.18■□□□□ 0.82
SPG7-202ENST00000341316 GREB1Q4ZG55 1949 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms