RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 CCNB1P14635 433 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 XPAP23025 273 aaPredicted RBP15.49■□□□□ 0.07
VAPA-201ENST00000340541 IL9RQ01113 521 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 SEMG2Q02383 582 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 RALGDSQ12967 914 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 CFAP58Q5T655 872 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 KDM7AQ6ZMT4 941 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 TMPRSS12Q86WS5 348 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 RFX6Q8HWS3 928 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 CCDC13Q8IYE1 715 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 DENND6BQ8NEG7 585 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.49■□□□□ 0.07
VAPA-201ENST00000340541 RBM22Q9NW64 420 aaKnown RBP eCLIP15.49■□□□□ 0.076e-8■■■■■ 33.4
VAPA-201ENST00000340541 TRIM10Q9UDY6 481 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 FTSJ1Q9UET6 329 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 AMACRQ9UHK6 382 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 COL5A1P20908 1838 aaPredicted RBP15.49■□□□□ 0.07
VAPA-201ENST00000340541 ADAMTS20P59510 1910 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 ARID1BQ8NFD5 2236 aaPredicted RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 hCG_1818297A0A087WSY0 165 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 GRID2IPA4D2P6 1211 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 TRABD2BA6NFA1 517 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 KCNK1O00180 336 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 MAGEC1O60732 1142 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 TM7SF2O76062 418 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 ZFXP17010 805 aaPredicted RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 CTNNA1P35221 906 aaKnown RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 RXRGP48443 463 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 GSDMDP57764 484 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 DYNLT1P63172 113 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 IFI35P80217 286 aaPredicted RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 DSC2Q02487 901 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 ZBTB17Q13105 803 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 SGCGQ13326 291 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 CAMK2BQ13554 666 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 LLGL1Q15334 1064 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 TFDP3Q5H9I0 405 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 TPRG1LQ5T0D9 272 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 ERAP2Q6P179 960 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 KYAT3Q6YP21 454 aaKnown RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 DPPA4Q7L190 304 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 KIAA1328Q86T90 577 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 RCOR2Q8IZ40 523 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 OXR1Q8N573 874 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 CNTD1Q8N815 330 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 TP53I13Q8NBR0 393 aaPredicted RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 CCNYQ8ND76 341 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 EXD1Q8NHP7 514 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 ARRDC2Q8TBH0 407 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 CXorf40AQ8TE69 158 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 SAP25Q8TEE9 199 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 ZNF830Q96NB3 372 aaPredicted RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 IL12RB2Q99665 862 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 SEMA3CQ99985 751 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 MAK16Q9BXY0 300 aaKnown RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 POLR1EQ9GZS1 481 aaKnown RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 CAAP1Q9H8G2 361 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 SAE1Q9UBE0 346 aaPredicted RBP15.48■□□□□ 0.07
VAPA-201ENST00000340541 ITPR1Q14643 2758 aa15.48■□□□□ 0.07
VAPA-201ENST00000340541 A6NNZ2 444 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 FZD6O60353 706 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 CST8O60676 142 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 ZRANB2O95218 330 aaKnown RBP eCLIP15.47■□□□□ 0.072e-6■■□□□ 11.6
VAPA-201ENST00000340541 PGLSO95336 258 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 C6P13671 934 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 PECAM1P16284 738 aaPredicted RBP15.47■□□□□ 0.07
VAPA-201ENST00000340541 EPHA8P29322 1005 aaPredicted RBP15.47■□□□□ 0.07
VAPA-201ENST00000340541 IGFALSP35858 605 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 ARRB1P49407 418 aaPredicted RBP15.47■□□□□ 0.07
VAPA-201ENST00000340541 LIG3P49916 1009 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 PEX5P50542 639 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 PFN3P60673 137 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 POLR2LP62875 67 aaKnown RBP15.47■□□□□ 0.07
VAPA-201ENST00000340541 NIPAL4Q0D2K0 466 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 ACACAQ13085 2346 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 TFDP2Q14188 446 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 AGERQ15109 404 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 PDK1Q15118 436 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 ODF2Q5BJF6 829 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 FAM182AQ5T1J6 154 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 Q6ZSR6 202 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 KANSL1Q7Z3B3 1105 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 FAM174AQ8TBP5 190 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 MDM1Q8TC05 714 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 KIAA1524Q8TCG1 905 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 HERPUD2Q9BSE4 406 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 MBNL1Q9NR56 388 aaKnown RBP15.47■□□□□ 0.07
VAPA-201ENST00000340541 COQ6Q9Y2Z9 468 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 PCDHA3Q9Y5H8 950 aa15.47■□□□□ 0.07
VAPA-201ENST00000340541 A0A1W2PQ67 120 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 MACROD2A1Z1Q3 448 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 CFAP69A5D8W1 941 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 GOLGA8CPA6NN73 597 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 GOLGA6L6A8MZA4 724 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 FPGTO14772 594 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 LDOC1O95751 146 aaPredicted RBP15.46■□□□□ 0.07
VAPA-201ENST00000340541 JCHAINP01591 159 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 ITGAVP06756 1048 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 MMP2P08253 660 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 PDHA1P08559 390 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms