RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 RNASEH2AO75792 299 aaKnown RBP13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 POMCP01189 267 aa13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 TFAP2AP05549 437 aa13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 SLC2A3P11169 496 aa13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 MSX2P35548 267 aaPredicted RBP13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 RHDQ02161 417 aa13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 ZNF678Q5SXM1 525 aa13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 SPATA2LQ8IUW3 424 aaPredicted RBP13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 SGF29Q96ES7 293 aa13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 TMA16Q96EY4 203 aaKnown RBP13.51□□□□□ -0.25
SECISBP2-201ENST00000339901 A0A1W2PQH9 124 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 E7ENX8 843 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 TXNDC9O14530 226 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 TNFAIP8O95379 198 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 SUOXP51687 545 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 APOFQ13790 326 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 FASTKQ14296 549 aaKnown RBP13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 UGT3A2Q3SY77 523 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 NOMO2Q5JPE7 1267 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 ISCA2Q86U28 154 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 SATL1Q86VE3 508 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 ALDH16A1Q8IZ83 802 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 GPR150Q8NGU9 434 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 DGCR14Q96DF8 476 aaKnown RBP13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 UNKQ9C0B0 810 aaKnown RBP13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 VCX3AQ9NNX9 186 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 PADI3Q9ULW8 664 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 SNRPB2P08579 225 aaKnown RBP13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 CDKN2DP55273 166 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 MYBPC1Q00872 1141 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 BTG3Q14201 252 aaPredicted RBP13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 MON1AQ86VX9 555 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 TRPV1Q8NER1 839 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 SOCS4Q8WXH5 440 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 SLC25A23Q9BV35 468 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 POPDC3Q9HBV1 291 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 TRAF6Q9Y4K3 522 aa13.5□□□□□ -0.25
SECISBP2-201ENST00000339901 CTSHP09668 335 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ATXN1LP0C7T5 689 aaKnown RBP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 HOXB8P17481 243 aaPredicted RBP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 GRIK1P39086 918 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 USP46P62068 366 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 PDAP1Q13442 181 aaKnown RBP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 PAN2Q504Q3 1202 aaKnown RBP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ARRDC2Q8TBH0 407 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 HMCESQ96FZ2 354 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ZNF597Q96LX8 424 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ZCWPW1Q9H0M4 648 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 SPAG4Q9NPE6 437 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 IL37Q9NZH6 218 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 TNPO2O14787 897 aaKnown RBP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ITGB1P05556 798 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 FGF4P08620 206 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 FDXRP22570 491 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 CD86P42081 329 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 CDKL1Q00532 357 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 TIAL1Q01085 375 aaKnown RBP eCLIP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 PCSK7Q16549 785 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 PPP1R3AQ16821 1122 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 MGAT5BQ3V5L5 792 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 MARC1Q5VT66 337 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 IL23RQ5VWK5 629 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 PAOXQ6QHF9 649 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 C17orf99Q6UX52 265 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 RNF148Q8N7C7 305 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ASB2Q96Q27 587 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 CYP2S1Q96SQ9 504 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ZYG11BQ9C0D3 744 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 RBM38Q9H0Z9 239 aaKnown RBP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 POLR3BQ9NW08 1133 aaPredicted RBP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 PCDHGB4Q9UN71 923 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 LZTS1Q9Y250 596 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 PCDHGB5Q9Y5G0 923 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 GBF1Q92538 1859 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ANKRD33BA6NCL7 494 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 J3KR12 359 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 LDB2O43679 373 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 RTN3O95197 1032 aaPredicted RBP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 HERVK_113P63132 956 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 UNC50Q53HI1 259 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 MS4A13Q5J8X5 152 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 C6orf10Q5SRN2 563 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 KDELC2Q7Z4H8 507 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ZNF598Q86UK7 904 aaKnown RBP13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 C2orf69Q8N8R5 385 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 SLCO4A1Q96BD0 722 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ROPN1LQ96C74 230 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 C8orf48Q96LL4 319 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 ERVK-6Q9BXR3 956 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 CYP4F12Q9HCS2 524 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 NT5MQ9NPB1 228 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 RIMKLBQ9ULI2 386 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 AP4S1Q9Y587 144 aa13.49□□□□□ -0.25
SECISBP2-201ENST00000339901 SLC7A1P30825 629 aa13.48□□□□□ -0.25
SECISBP2-201ENST00000339901 CD52P31358 61 aa13.48□□□□□ -0.25
SECISBP2-201ENST00000339901 KCNC1P48547 511 aa13.48□□□□□ -0.25
SECISBP2-201ENST00000339901 TXNL4AP83876 142 aaKnown RBP13.48□□□□□ -0.25
SECISBP2-201ENST00000339901 SLC10A7Q0GE19 358 aa13.48□□□□□ -0.25
SECISBP2-201ENST00000339901 AGKQ53H12 422 aa13.48□□□□□ -0.25
SECISBP2-201ENST00000339901 SIRPB2Q5JXA9 342 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms