RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 TMEM134Q9H6X4 195 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 FBXO8Q9NRD0 319 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 MRGBPQ9NV56 204 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 GTF2IRD1Q9UHL9 959 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 PMF1-BGLAPU3KQ54 211 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 ZNF646O15015 1829 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 A0A1W2PQ67 120 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 RNF103O00237 685 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 PSAPP07602 524 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 GFAPP14136 432 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 SLC12A1Q13621 1099 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 SNX17Q15036 470 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 POLD3Q15054 466 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CARTPTQ16568 116 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 PAGE2BQ5JRK9 111 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 AKAP14Q86UN6 197 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 FAM35AQ86V20 835 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 ZCCHC7Q8N3Z6 543 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 NETO2Q8NC67 525 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 PAPD5Q8NDF8 572 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 P2RY11Q96G91 374 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CPB2Q96IY4 423 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 TRIM15Q9C019 465 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 SNX25Q9H3E2 840 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 TRIT1Q9H3H1 467 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 PXMP2Q9NR77 195 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CHRAC1Q9NRG0 131 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CMTM6Q9NX76 183 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 XPR1Q9UBH6 696 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CPSF3Q9UKF6 684 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 FIS1Q9Y3D6 152 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 ZFC3H1O60293 1989 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 TCRBV5S2A0A599 114 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 HACD1B0YJ81 288 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CENPBD1B2RD01 187 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 USP12O75317 370 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CILPO75339 1184 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 PFKMP08237 780 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CHRNB1P11230 501 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 KCNA2P16389 499 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 SAT1P21673 171 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CXCR2P25025 360 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CD68P34810 354 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 ATXN1P54253 815 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 PRPSAP1Q14558 356 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 ABHD15Q6UXT9 468 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 C14orf80Q86SX3 495 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 TXNDC5Q8NBS9 432 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 OR6Q1Q8NGQ2 317 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 GABPB2Q8TAK5 448 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 MUL1Q969V5 352 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 RPL10LQ96L21 214 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 UBXN10Q96LJ8 280 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 KCTD15Q96SI1 283 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 HOPXQ9BPY8 73 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 ALOXE3Q9BYJ1 711 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 RHOBTB2Q9BYZ6 727 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 GLIS2Q9BZE0 524 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 MRPL46Q9H2W6 279 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 IL1RL2Q9HB29 575 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 CPNE5Q9HCH3 593 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 INTS10Q9NVR2 710 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 GTSE1Q9NYZ3 720 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 WARS2Q9UGM6 360 aaKnown RBP9.44□□□□□ -0.9
NECAP1-201ENST00000339754 PCDHGA3Q9Y5H0 932 aa9.44□□□□□ -0.9
NECAP1-201ENST00000339754 DYTNA2CJ06 578 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 ARPC2O15144 300 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 MGEA5O60502 916 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 GPC4O75487 556 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 GPIP06744 558 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 FCGR1AP12314 374 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 POLR2EP19388 210 aaKnown RBP9.43□□□□□ -0.9
NECAP1-201ENST00000339754 GPX3P22352 226 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 SDC4P31431 198 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 AVPR1AP37288 418 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 HADHAP40939 763 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 ACTR2P61160 394 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 SP4Q02446 784 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 BNIP2Q12982 314 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 USP10Q14694 798 aaKnown RBP9.43□□□□□ -0.9
NECAP1-201ENST00000339754 ACAP2Q15057 778 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 GEN1Q17RS7 908 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 ZIK1Q3SY52 487 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-201ENST00000339754 XKR3Q5GH77 459 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 RBM48Q5RL73 367 aaKnown RBP9.43□□□□□ -0.9
NECAP1-201ENST00000339754 SLX4IPQ5VYV7 408 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 FAM219BQ5XKK7 198 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 MAP1SQ66K74 1059 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-201ENST00000339754 TTC23LQ6PF05 361 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 ZPBP2Q6X784 338 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 CYHR1Q6ZMK1 362 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 KCNMB4Q86W47 210 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 ZC3HC1Q86WB0 502 aaKnown RBP9.43□□□□□ -0.9
NECAP1-201ENST00000339754 CPXCR1Q8N123 301 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 ZNF567Q8N184 647 aa9.43□□□□□ -0.9
NECAP1-201ENST00000339754 SPATA6LQ8N4H0 392 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms