RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 GIT1Q9Y2X7 761 aa10.87□□□□□ -0.67
RTN3-201ENST00000338850 NUP205Q92621 2012 aa10.87□□□□□ -0.67
RTN3-201ENST00000338850 DYTNA2CJ06 578 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 YJEFN3A6XGL0 299 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 F8W810 466 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 HCRTO43612 131 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 ZBTB14O43829 449 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 AP1G2O75843 785 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 BEST1O76090 585 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 LRIG2O94898 1065 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 URODP06132 367 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 SLC35E2BP0CK96 405 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 AKAP5P24588 427 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 ADRA1AP35348 466 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 TUBP50607 506 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 PAPOLAP51003 745 aaKnown RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 ATP4BP51164 291 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 INHBCP55103 352 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 RAB10P61026 200 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 POU4F1Q01851 419 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 ZBTB17Q13105 803 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 MSLNQ13421 630 aaPredicted RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 MED21Q13503 144 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 PPP2R5DQ14738 602 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 PIGGQ5H8A4 983 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 MDH1BQ5I0G3 518 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 PPM1JQ5JR12 505 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 IER5LQ5T953 404 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 WSCD1Q658N2 575 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 CWF19L1Q69YN2 538 aaKnown RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 LRRC8EQ6NSJ5 796 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 FAM171BQ6P995 826 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 NAPRTQ6XQN6 538 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 HACD2Q6Y1H2 254 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 BNC2Q6ZN30 1099 aaPredicted RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 GPR149Q86SP6 731 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 TICAM1Q8IUC6 712 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 PQLC1Q8N2U9 271 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 C2CD4AQ8NCU7 369 aaPredicted RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 PPHLN1Q8NEY8 458 aaKnown RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 PRSS33Q8NF86 280 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 CALML6Q8TD86 181 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 AGAP3Q96P47 875 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 GBP5Q96PP8 586 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 TBL1YQ9BQ87 522 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 MRPL57Q9BQC6 102 aaKnown RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 LPIN3Q9BQK8 851 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 ACBD6Q9BR61 282 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 MED10Q9BTT4 135 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 TRMOQ9BU70 441 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 MRPL46Q9H2W6 279 aaKnown RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 CATSPERBQ9H7T0 1116 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 SFXN1Q9H9B4 322 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 ZBTB26Q9HCK0 441 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 TREX1Q9NSU2 369 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 C20orf96Q9NUD7 363 aaPredicted RBP10.86□□□□□ -0.67
RTN3-201ENST00000338850 DDIT4Q9NX09 232 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 OSER1Q9NX31 292 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 SEPT10Q9P0V9 454 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 CDYLQ9Y232 598 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 TCAF1Q9Y4C2 921 aa10.86□□□□□ -0.67
RTN3-201ENST00000338850 MEI4A8MW99 385 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.85□□□□□ -0.67
RTN3-201ENST00000338850 FAM72CH0Y354 149 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 I6L893 689 aaPredicted RBP10.85□□□□□ -0.67
RTN3-201ENST00000338850 KCNK1O00180 336 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 MATN3O15232 486 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 TEX28O15482 410 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 IRAK2O43187 625 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 GRID2O43424 1007 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 SMIM24O75264 130 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 SBK3P0C264 359 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 CDC25CP30307 473 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 ARCN1P48444 511 aaKnown RBP10.85□□□□□ -0.67
RTN3-201ENST00000338850 CLCN5P51795 746 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 NAA20P61599 178 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 NME3Q13232 169 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 DYNC1I2Q13409 638 aaKnown RBP10.85□□□□□ -0.67
RTN3-201ENST00000338850 CUL3Q13618 768 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 GRM3Q14832 879 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 SPATS1Q496A3 300 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 SLC9B1Q4ZJI4 515 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 HSP90AA5PQ58FG0 334 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 FAM72AQ5TYM5 149 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 KIAA0319Q5VV43 1072 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 FAM72DQ6L9T8 149 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 RNF111Q6ZNA4 994 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 RAPH1Q70E73 1250 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 CHSY3Q70JA7 882 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 FAM72BQ86X60 149 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 UBALD2Q8IYN6 164 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 CENPLQ8N0S6 344 aaPredicted RBP10.85□□□□□ -0.67
RTN3-201ENST00000338850 PHTF2Q8N3S3 785 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 MAPK15Q8TD08 544 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 MFSD3Q96ES6 412 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 PCED1BQ96HM7 432 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 UROC1Q96N76 676 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 GPR78Q96P69 363 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 CYP2S1Q96SQ9 504 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms