RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 RGSL1A5PLK6 1076 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ATP6V0D1P61421 351 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 SPATA16Q9BXB7 569 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 SLC17A6Q9P2U8 582 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 BTRCQ9Y297 605 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 H3BMM5 538 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TK2O00142 265 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 KPNA3O00505 521 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 MLYCDO95822 493 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ANPEPP15144 967 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 CYP2A7P20853 494 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 FASP25445 335 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 HSPA14Q0VDF9 509 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 PDE1CQ14123 709 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ACAP2Q15057 778 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 OTOP2Q7RTS6 562 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 MIER2Q8N344 545 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 OR4K2Q8NGD2 314 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 GFM2Q969S9 779 aaKnown RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 PARVBQ9HBI1 364 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 SLC24A3Q9HC58 644 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 GKN1Q9NS71 199 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 J3KR12 359 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 SLC7A4O43246 635 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 VAV1P15498 845 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 CCNG1P51959 295 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 GSCP56915 257 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 GPR17Q13304 367 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 RAB42Q8N4Z0 105 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 FAM120BQ96EK7 910 aaKnown RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 DNAJC1Q96KC8 554 aaKnown RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ATP13A3Q9H7F0 1226 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 SLC4A7Q9Y6M7 1214 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 PSMA4P25789 261 aaKnown RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 UPP1Q16831 310 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 LSM12Q3MHD2 195 aaKnown RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 MORN1Q5T089 497 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 DHFR2Q86XF0 187 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 HPS6Q86YV9 775 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 C17orf80Q9BSJ5 609 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ZFYVE1Q9HBF4 777 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 LRCH1Q9Y2L9 728 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 V9GYQ6 96 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 KNTC1P50748 2209 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ZBTB14O43829 449 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ADH1AP07327 375 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 F7P08709 466 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 MPSTP25325 297 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 PHEXP78562 749 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 GALNT2Q10471 571 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TXNDC11Q6PKC3 985 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 CYS1Q717R9 158 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 GPRIN1Q7Z2K8 1008 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TJP1Q07157 1748 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 LAMB1P07942 1786 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 SLC38A8A6NNN8 435 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 AHSGP02765 367 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 ANXA5P08758 320 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 GPR15P49685 360 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 PSME3P61289 254 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SDE2Q6IQ49 451 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CDYL2Q8N8U2 506 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SLC2A13Q96QE2 648 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CADM1Q9BY67 442 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CFAP97Q9P2B7 532 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 C1orf232A0A0U1RR37 186 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 XYLBO75191 536 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SLC11A1P49279 550 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 AP1ARQ63HQ0 302 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 ZYG11AQ6WRX3 759 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 NSMCE2Q96MF7 247 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 LENG8Q96PV6 779 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 TRAV19A0A0A6YYK7 116 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SNUPNO95149 360 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 TRIM32Q13049 653 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SAMD4BQ5PRF9 694 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 OR10T2Q8NGX3 314 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CNBD2Q96M20 576 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CCDC28BQ9BUN5 200 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 DENND2DQ9H6A0 471 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CCSER2Q9H7U1 834 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 ARHGEF3Q9NR81 526 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 MOCS1Q9NZB8 636 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 KLQ9UEF7 1012 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CPQQ9Y646 472 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 MTMR11A4FU01 709 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CPSF4O95639 269 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CYP2A6P11509 494 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 TLE2Q04725 743 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 WLSQ5T9L3 541 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 ADAMTSL2Q86TH1 951 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 METTL3Q86U44 580 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 C2orf15Q8WU43 125 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 ARL15Q9NXU5 204 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SLC13A4Q9UKG4 626 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 RAI2Q9Y5P3 530 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 PRMT5O14744 637 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 HAPLN1P10915 354 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 PIK3CGP48736 1102 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms