RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ITGB6P18564 788 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 ZNF135P52742 658 aaPredicted RBP12.65□□□□□ -0.38
LIMK1-201ENST00000336180 RALGPS1Q5JS13 557 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 TMCO4Q5TGY1 634 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 POTEHQ6S545 545 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 CYS1Q717R9 158 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 TXNDC5Q8NBS9 432 aaKnown RBP12.65□□□□□ -0.38
LIMK1-201ENST00000336180 RBM15BQ8NDT2 890 aaKnown RBP12.65□□□□□ -0.38
LIMK1-201ENST00000336180 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 TOP1MTQ969P6 601 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 MCUR1Q96AQ8 359 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 PTCD3Q96EY7 689 aaKnown RBP12.65□□□□□ -0.38
LIMK1-201ENST00000336180 THTPAQ9BU02 230 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 GALPQ9UBC7 116 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 TBX21Q9UL17 535 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 LCHNA4D1U4 455 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 H3BNC9 293 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 PPP6CO00743 305 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 RFPL2O75678 378 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 PDE5AO76074 875 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 GNRH1P01148 92 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 CXCL10P02778 98 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 SOD2P04179 222 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 CLTBP09497 229 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 CNPP09543 421 aaKnown RBP12.64□□□□□ -0.39
LIMK1-201ENST00000336180 SYN1P17600 705 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 FMO4P31512 558 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 EPHB1P54762 984 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 WDR5P61964 334 aaKnown RBP12.64□□□□□ -0.39
LIMK1-201ENST00000336180 IL10RBQ08334 325 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 KPNB1Q14974 876 aaKnown RBP12.64□□□□□ -0.39
LIMK1-201ENST00000336180 PPM1LQ5SGD2 360 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 APCDD1Q8J025 514 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 TMEM151AQ8N4L1 468 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 DCBLD1Q8N8Z6 715 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 ACMSDQ8TDX5 336 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 TMEM175Q9BSA9 504 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 POMKQ9H5K3 350 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 AFF4Q9UHB7 1163 aaKnown RBP12.64□□□□□ -0.39
LIMK1-201ENST00000336180 PLA2G4CQ9UP65 541 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 MYOFQ9NZM1 2061 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 HEATR9A2RTY3 570 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 CFAP73A6NFT4 308 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 SMAD6O43541 496 aaKnown RBP12.64□□□□□ -0.39
LIMK1-201ENST00000336180 OR1I1O60431 355 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 TRIM13O60858 407 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 COL6A1P12109 1028 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 WEE1P30291 646 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 PEX19P40855 299 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 HECTD2Q5U5R9 776 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 TRIM42Q8IWZ5 723 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 SLC39A11Q8N1S5 342 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 DDI1Q8WTU0 396 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 CORO1BQ9BR76 489 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 CFHR5Q9BXR6 569 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 WWP1Q9H0M0 922 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 LRMDAQ9H2I8 198 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.64□□□□□ -0.39
LIMK1-201ENST00000336180 GIMAP2Q9UG22 337 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 PATJQ8NI35 1801 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 ATP6AP2A0A1C7CYW4 349 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 TRIM24O15164 1050 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 BIRC5O15392 142 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 ATP6AP2O75787 350 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 SERPINF2P08697 491 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 CSKP41240 450 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 SLC12A1Q13621 1099 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 VEPH1Q14D04 833 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 CLEC14AQ86T13 490 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 MDGA1Q8NFP4 955 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 SCUBE2Q9NQ36 999 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 VPS45Q9NRW7 570 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 MKS1Q9NXB0 559 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 KCNK4Q9NYG8 393 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 INSL5Q9Y5Q6 135 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 PTGDR2Q9Y5Y4 395 aa12.64□□□□□ -0.39
LIMK1-201ENST00000336180 DOCK4Q8N1I0 1966 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 FNDC1Q4ZHG4 1894 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 WASH4PA8MWX3 477 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 C9JVG2 144 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 KLF11O14901 512 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 PSMD3O43242 534 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 ZBTB14O43829 449 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 SIX3O95343 332 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 PAMP19021 973 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 PMLP29590 882 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 MAGEA8P43361 318 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 CSE1LP55060 971 aaKnown RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 ARF5P84085 180 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 FOXD4Q12950 439 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 MSLNQ13421 630 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 CYTH1Q15438 398 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 SPDYAQ5MJ70 313 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 ANKRD33Q7Z3H0 272 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 CAMK1DQ8IU85 385 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 RNF148Q8N7C7 305 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 C2CD4AQ8NCU7 369 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 CATSPER2Q96P56 530 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms