RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TCAF2A6NFQ2 919 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 TMEM189-UBE2V1I3L0A0 370 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 DPP6P42658 865 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 C1QTNF8P60827 252 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 XIAPP98170 497 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 TAF10Q12962 218 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 ZNF235Q14590 738 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 FAM171A1Q5VUB5 890 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 TEX26Q8N6G2 289 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 BHLHE22Q8NFJ8 381 aaPredicted RBP17.78■□□□□ 0.44
LRCH3-201ENST00000334859 ARRDC2Q8TBH0 407 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 SEPT5Q99719 369 aaPredicted RBP17.78■□□□□ 0.44
LRCH3-201ENST00000334859 TRPC7Q9HCX4 862 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.78■□□□□ 0.44
LRCH3-201ENST00000334859 PSMD13Q9UNM6 376 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 CASQ2O14958 399 aaPredicted RBP17.78■□□□□ 0.44
LRCH3-201ENST00000334859 S1PR4O95977 384 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 ATXN1LP0C7T5 689 aaKnown RBP17.78■□□□□ 0.44
LRCH3-201ENST00000334859 UQCRBP14927 111 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 TCN1P20061 433 aaPredicted RBP17.78■□□□□ 0.44
LRCH3-201ENST00000334859 ME2P23368 584 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 ACVRL1P37023 503 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 ALDH1A3P47895 512 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 IL10RBQ08334 325 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 MMEL1Q495T6 779 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 SLC22A9Q8IVM8 553 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 PELI3Q8N2H9 469 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 ICA1LQ8NDH6 482 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 TSC22D3Q99576 134 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 MRPL1Q9BYD6 325 aaKnown RBP17.78■□□□□ 0.44
LRCH3-201ENST00000334859 TLR8Q9NR97 1041 aaKnown RBP17.78■□□□□ 0.44
LRCH3-201ENST00000334859 C6orf203Q9P0P8 240 aaPredicted RBP17.78■□□□□ 0.44
LRCH3-201ENST00000334859 BCAP29Q9UHQ4 241 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 VPS28Q9UK41 221 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 DTNAQ9Y4J8 743 aa17.78■□□□□ 0.44
LRCH3-201ENST00000334859 ENO4A6NNW6 628 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 CA12O43570 354 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 LDB2O43679 373 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 TSPAN8P19075 237 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 MAGEA11P43364 429 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 SERINC3Q13530 473 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 PTK2BQ14289 1009 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 GALNT3Q14435 633 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 MBTPS1Q14703 1052 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 SLC14A2Q15849 920 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 PPP1R3AQ16821 1122 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 MGAT5BQ3V5L5 792 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 PARP15Q460N3 678 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 RYBPQ8N488 228 aaPredicted RBP17.77■□□□□ 0.44
LRCH3-201ENST00000334859 SPPL2BQ8TCT7 592 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 TBATAQ96M53 351 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 GBP5Q96PP8 586 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 POLR1EQ9GZS1 481 aaKnown RBP17.77■□□□□ 0.44
LRCH3-201ENST00000334859 OLA1Q9NTK5 396 aaKnown RBP17.77■□□□□ 0.44
LRCH3-201ENST00000334859 ADA2Q9NZK5 511 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 ASB3Q9Y575 518 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 ARL5AQ9Y689 179 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 SQORQ9Y6N5 450 aa17.77■□□□□ 0.44
LRCH3-201ENST00000334859 CAPN8A6NHC0 703 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 UBDO15205 165 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 TRPA1O75762 1119 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 SUPT7LO94864 414 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 MT-CO1P00395 513 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 PIRTP0C851 137 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 CST5P28325 142 aaPredicted RBP17.77■□□□□ 0.43
LRCH3-201ENST00000334859 RFTN1Q14699 578 aaPredicted RBP17.77■□□□□ 0.43
LRCH3-201ENST00000334859 PTPRCAPQ14761 206 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 FAM219BQ5XKK7 198 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 TMEM207Q6UWW9 146 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 GALNT7Q86SF2 657 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 OR52K2Q8NGK3 314 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 DNAJC1Q96KC8 554 aaKnown RBP17.77■□□□□ 0.43
LRCH3-201ENST00000334859 LRGUKQ96M69 825 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 ZIC5Q96T25 663 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 MEAF6Q9HAF1 191 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.77■□□□□ 0.43
LRCH3-201ENST00000334859 VWA8A3KMH1 1905 aa17.77■□□□□ 0.43
LRCH3-201ENST00000334859 SYN3O14994 580 aa17.76■□□□□ 0.43
LRCH3-201ENST00000334859 VCLP18206 1134 aa17.76■□□□□ 0.43
LRCH3-201ENST00000334859 MS4A2Q01362 244 aa17.76■□□□□ 0.43
LRCH3-201ENST00000334859 FASTKQ14296 549 aaKnown RBP17.76■□□□□ 0.43
LRCH3-201ENST00000334859 RARS2Q5T160 578 aaKnown RBP17.76■□□□□ 0.43
LRCH3-201ENST00000334859 OGFRL1Q5TC84 451 aaPredicted RBP17.76■□□□□ 0.43
LRCH3-201ENST00000334859 CLEC6AQ6EIG7 209 aa17.76■□□□□ 0.43
LRCH3-201ENST00000334859 FAM156AQ8NDB6 213 aa17.76■□□□□ 0.43
LRCH3-201ENST00000334859 SH3RF2Q8TEC5 729 aa17.76■□□□□ 0.43
LRCH3-201ENST00000334859 MYEOVQ96EZ4 313 aa17.76■□□□□ 0.43
LRCH3-201ENST00000334859 LOC285095A0A1B0GVY8 99 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 RTN3O95197 1032 aaPredicted RBP17.75■□□□□ 0.43
LRCH3-201ENST00000334859 GLP2RO95838 553 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 HSPA1AP0DMV8 641 aaKnown RBP17.75■□□□□ 0.43
LRCH3-201ENST00000334859 HSPA1BP0DMV9 641 aaKnown RBP17.75■□□□□ 0.43
LRCH3-201ENST00000334859 ACLYP53396 1101 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 PDAP1Q13442 181 aaKnown RBP17.75■□□□□ 0.43
LRCH3-201ENST00000334859 SQLEQ14534 574 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 RASIP1Q5U651 963 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 FOXB2Q5VYV0 432 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 FAM45BPQ6NSW5 357 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 ZFP1Q6P2D0 407 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 PCDH20Q8N6Y1 951 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms