RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 PDCD2Q16342 344 aaPredicted RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 TYSND1Q2T9J0 566 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 SPATS1Q496A3 300 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 SIRPB2Q5JXA9 342 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CLLU1OSQ5K130 101 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 PPM1LQ5SGD2 360 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 NXNQ6DKJ4 435 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ZNF280DQ6N043 979 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 FBXL22Q6P050 247 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 TRAF7Q6Q0C0 670 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CUZD1Q86UP6 607 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ST13P4Q8IZP2 240 aaPredicted RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ICA1LQ8NDH6 482 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 AGR3Q8TD06 166 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ASB9Q96DX5 294 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CDK5RAP1Q96SZ6 601 aaKnown RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 TSC22D3Q99576 134 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 LBHD1Q9BQE6 289 aaPredicted RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 SLC25A23Q9BV35 468 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 MRPL1Q9BYD6 325 aaKnown RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ELAC1Q9H777 363 aaKnown RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 PDFQ9HBH1 243 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 NDUFA13Q9P0J0 144 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 GMIPQ9P107 970 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 DTNAQ9Y4J8 743 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 BBIP1A8MTZ0 92 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 J3KR12 359 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 AURKAO14965 403 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 B4GALT3O60512 393 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 RNASEH1O60930 286 aaKnown RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 SKAP2O75563 359 aaPredicted RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 SORBS2O94875 1100 aaKnown RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 XRCC1P18887 633 aaPredicted RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 CD9P21926 228 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 AQP4P55087 323 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 PRAMEP78395 509 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 DSC2Q02487 901 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 CREB5Q02930 508 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 CACNB2Q08289 660 aaPredicted RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 PEX6Q13608 980 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 POLD3Q15054 466 aaPredicted RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 PCSK7Q16549 785 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 ALFQ53S48 1182 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 ZNF789Q5FWF6 425 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 VARS2Q5ST30 1063 aaKnown RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 TMEM198Q66K66 360 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 MRNIPQ6NTE8 343 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 C8orf82Q6P1X6 216 aaPredicted RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 SAPCD2Q86UD0 394 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 BRSK1Q8TDC3 778 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 NCSTNQ92542 709 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 GBP5Q96PP8 586 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 TUBGCP5Q96RT8 1024 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 CENPKQ9BS16 269 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 ATXN3LQ9H3M9 355 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 TFB2MQ9H5Q4 396 aaKnown RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 RRAGCQ9HB90 399 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 INTS10Q9NVR2 710 aaKnown RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 PLK2Q9NYY3 685 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 GTSE1Q9NYZ3 720 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 MARCH2Q9P0N8 246 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 EPS15L1Q9UBC2 864 aa10.78□□□□□ -0.68
CCDC172-201ENST00000333254 UXTQ9UBK9 157 aaPredicted RBP10.78□□□□□ -0.68
CCDC172-201ENST00000333254 KIAA1671Q9BY89 1806 aa10.77□□□□□ -0.68
CCDC172-201ENST00000333254 TRIM24O15164 1050 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 UBDO15205 165 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 SMIM24O75264 130 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 RPP40O75818 363 aaKnown RBP10.77□□□□□ -0.69
CCDC172-201ENST00000333254 CNTN5O94779 1100 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 OR4Q2P0C623 313 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 KCNA5P22460 613 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 FGFR3P22607 806 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 CES1P23141 567 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 DPP6P42658 865 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 FLT3LGP49771 235 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 PSME3P61289 254 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 HERVK_113P63132 956 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 EFEMP1Q12805 493 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 GPR17Q13304 367 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 LRP8Q14114 963 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 IHHQ14623 411 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 COQ5Q5HYK3 327 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 ZNF678Q5SXM1 525 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 LPCAT4Q643R3 524 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 LARP4Q71RC2 724 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCDC172-201ENST00000333254 ISCA2Q86U28 154 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 RTN4RL1Q86UN2 441 aaPredicted RBP10.77□□□□□ -0.69
CCDC172-201ENST00000333254 ZNF280BQ86YH2 543 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 BBS5Q8N3I7 341 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 PGBD5Q8N414 524 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 GOLM1Q8NBJ4 401 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 LINC01599Q8WXQ3 324 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 IGSF8Q969P0 613 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 FBXO32Q969P5 355 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 HDAC10Q969S8 669 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 PSMG2Q969U7 264 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 ROPN1LQ96C74 230 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 PABPC5Q96DU9 382 aaKnown RBP10.77□□□□□ -0.69
CCDC172-201ENST00000333254 TCF12Q99081 682 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 TTLL2Q9BWV7 592 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 1209.9 ms