RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 ANO4Q32M45 955 aa17.24■□□□□ 0.35
PRKCD-201ENST00000330452 NANOGQ9H9S0 305 aa17.24■□□□□ 0.35
PRKCD-201ENST00000330452 DTLQ9NZJ0 730 aa17.24■□□□□ 0.35
PRKCD-201ENST00000330452 SIRPGQ9P1W8 387 aa17.24■□□□□ 0.35
PRKCD-201ENST00000330452 SLC8A2Q9UPR5 921 aa17.24■□□□□ 0.35
PRKCD-201ENST00000330452 WDR27A2RRH5 827 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 GOT1P17174 413 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 AOC1P19801 751 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 LMO2P25791 158 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 RPL10P27635 214 aaKnown RBP17.23■□□□□ 0.35
PRKCD-201ENST00000330452 TEX44Q53QW1 395 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 SNAP47Q5SQN1 464 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 ADAMTSL2Q86TH1 951 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 SNX29P2Q8IUI4 249 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 RASSF5Q8WWW0 418 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 LRRC39Q96DD0 335 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 ZIC5Q96T25 663 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 LGMNQ99538 433 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 APOL6Q9BWW8 343 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 CEP41Q9BYV8 373 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 OR2B2Q9GZK3 357 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 KATNBL1Q9H079 304 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 WWP1Q9H0M0 922 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 COPS7BQ9H9Q2 264 aaPredicted RBP17.23■□□□□ 0.35
PRKCD-201ENST00000330452 SCPEP1Q9HB40 452 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 A0A087WXM4 84 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 C7orf72A4D263 438 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 CLPXO76031 633 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 HOXA11P31270 313 aaPredicted RBP17.23■□□□□ 0.35
PRKCD-201ENST00000330452 AQP5P55064 265 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 RACK1P63244 317 aaKnown RBP17.23■□□□□ 0.35
PRKCD-201ENST00000330452 CCNA1P78396 465 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 GRIK4Q16099 956 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 ATG16L1Q676U5 607 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 NCBP2-AS2Q69YL0 99 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 HEATR6Q6AI08 1181 aaKnown RBP17.23■□□□□ 0.35
PRKCD-201ENST00000330452 KRT80Q6KB66 452 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 C16orf46Q6P387 395 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 CASC4Q6P4E1 433 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 ADGRF2Q8IZF7 708 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 FBXW8Q8N3Y1 598 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 PPTC7Q8NI37 304 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 C11orf84Q9BUA3 381 aaPredicted RBP17.23■□□□□ 0.35
PRKCD-201ENST00000330452 RSPH9Q9H1X1 276 aaPredicted RBP17.23■□□□□ 0.35
PRKCD-201ENST00000330452 TMPRSS4Q9NRS4 437 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 SLC27A5Q9Y2P5 690 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 PCDHA11Q9Y5I1 949 aa17.23■□□□□ 0.35
PRKCD-201ENST00000330452 PEX14O75381 377 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 CAPNS1P04632 268 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 TPSB2P20231 275 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 OPRL1P41146 370 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 GRIA3P42263 894 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 TPSAB1Q15661 275 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.22■□□□□ 0.353e-6■■■■□ 20.2
PRKCD-201ENST00000330452 UGT3A1Q6NUS8 523 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 KCTD20Q7Z5Y7 419 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 FAM131BQ86XD5 332 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 NT5DC4Q86YG4 428 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 SAMD14Q8IZD0 417 aaPredicted RBP17.22■□□□□ 0.35
PRKCD-201ENST00000330452 C2orf69Q8N8R5 385 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 OR6J1Q8NGC5 347 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 FIG4Q92562 907 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 QKIQ96PU8 341 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRKCD-201ENST00000330452 NPLQ9BXD5 320 aaPredicted RBP17.22■□□□□ 0.35
PRKCD-201ENST00000330452 UGT2A1Q9Y4X1 527 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 PTPN9P43378 593 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 MAP3K7CLP57077 242 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 BSPRYQ5W0U4 402 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 ZCCHC8Q6NZY4 707 aaKnown RBP17.22■□□□□ 0.35
PRKCD-201ENST00000330452 LYPD8Q6UX82 237 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 MAGEE1Q9HCI5 957 aa17.22■□□□□ 0.35
PRKCD-201ENST00000330452 ERVH48-1M5A8F1 160 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 BPGMP07738 259 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 SERPINA6P08185 405 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 ITIH1P19827 911 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 AKAP5P24588 427 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 EPHA3P29320 983 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 PMS2P3Q13401 168 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 DSC3Q14574 896 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 ZNF846Q147U1 533 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 MAPRE1Q15691 268 aaKnown RBP17.21■□□□□ 0.35
PRKCD-201ENST00000330452 IGSF11Q5DX21 431 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 SLC26A9Q7LBE3 791 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 CENPIQ92674 756 aaPredicted RBP17.21■□□□□ 0.35
PRKCD-201ENST00000330452 EBF4Q9BQW3 602 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 TINF2Q9BSI4 451 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 CCSER2Q9H7U1 834 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 SYTL2Q9HCH5 934 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 MAU2Q9Y6X3 613 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 SYNJ2BP-COX16A0A087WUM0 186 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 CLDN25C9JDP6 229 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 ASNA1O43681 348 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 ICAM2P13598 275 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 CRHR1P34998 444 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 CBX5P45973 191 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 ZNF157P51786 506 aaPredicted RBP17.21■□□□□ 0.35
PRKCD-201ENST00000330452 SESN2P58004 480 aaPredicted RBP17.21■□□□□ 0.35
PRKCD-201ENST00000330452 SEMA5AQ13591 1074 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 POU6F1Q14863 301 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 LDLRAP1Q5SW96 308 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms