RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 HOXA2O43364 376 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 SORBS2O94875 1100 aaKnown RBP21.5■■□□□ 1.03
LIMS2-201ENST00000324938 KCNA5P22460 613 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 HOXD9P28356 352 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-201ENST00000324938 CDKN2DP55273 166 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 SATB1Q01826 763 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 FAM45BPQ6NSW5 357 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 LDB1Q86U70 411 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-201ENST00000324938 KBTBD2Q8IY47 623 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 CRIPAKQ8N1N5 446 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 PNPLA1Q8N8W4 532 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 FAM45AQ8TCE6 357 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 ANKRD49Q8WVL7 239 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 SEPT8Q92599 483 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 CATSPER2Q96P56 530 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 TTC1Q99614 292 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 RETREG1Q9H6L5 497 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 HMX1Q9NP08 348 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-201ENST00000324938 PRPF19Q9UMS4 504 aaKnown RBP21.5■■□□□ 1.03
LIMS2-201ENST00000324938 TANC1Q9C0D5 1861 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 SDHDO14521 159 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 ACSL4O60488 711 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 CD1EP15812 388 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 SLC6A4P31645 630 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 SULT2A1Q06520 285 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 PPM1LQ5SGD2 360 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 TMEM198Q66K66 360 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 NXNQ6DKJ4 435 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 PRSS55Q6UWB4 352 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-201ENST00000324938 TAS1R1Q7RTX1 841 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 HPS6Q86YV9 775 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 GPR150Q8NGU9 434 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 CCDC124Q96CT7 223 aaKnown RBP21.5■■□□□ 1.03
LIMS2-201ENST00000324938 FAR2Q96K12 515 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 TBATAQ96M53 351 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 MAGEH1Q9H213 219 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 ZBTB26Q9HCK0 441 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 GTSE1Q9NYZ3 720 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 DNMT3LQ9UJW3 386 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 RIMKLBQ9ULI2 386 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 NUDT2P50583 147 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 CYLC2Q14093 348 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 C16orf89Q6UX73 402 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 SLC22A9Q8IVM8 553 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 SPNS2Q8IVW8 549 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 FAM126BQ8IXS8 530 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 CFAP52Q8N1V2 620 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 BLOC1S5Q8TDH9 187 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 BCL7CQ8WUZ0 217 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 DNAJC1Q96KC8 554 aaKnown RBP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 CEP295NLQ96MC4 621 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 MGME1Q9BQP7 344 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 CFHR5Q9BXR6 569 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 CYP4F12Q9HCS2 524 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 CORO1CQ9ULV4 474 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 G3BP2Q9UN86 482 aaKnown RBP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 ARL5AQ9Y689 179 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 AIM2O14862 343 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 SERPINF2P08697 491 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 HNRNPLP14866 589 aaKnown RBP eCLIP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 SP100P23497 879 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 ATP5C1P36542 298 aaKnown RBP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 GNA12Q03113 381 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 GALNT1Q10472 559 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 GALNT3Q14435 633 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 TCTN1Q2MV58 587 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 TMEM207Q6UWW9 146 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 KYQ8NBH2 561 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 BRSK1Q8TDC3 778 aa21.49■■□□□ 1.03
LIMS2-201ENST00000324938 EML4Q9HC35 981 aaKnown RBP21.49■■□□□ 1.03
LIMS2-201ENST00000324938 A0A0D9SEW6 157 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 RPP40O75818 363 aaKnown RBP21.48■■□□□ 1.03
LIMS2-201ENST00000324938 SMNDC1O75940 238 aaKnown RBP eCLIP21.48■■□□□ 1.03
LIMS2-201ENST00000324938 BAG2O95816 211 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 GLP2RO95838 553 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 GOT2P00505 430 aaKnown RBP21.48■■□□□ 1.03
LIMS2-201ENST00000324938 HOXB8P17481 243 aaPredicted RBP21.48■■□□□ 1.03
LIMS2-201ENST00000324938 FDXRP22570 491 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 IRGCQ6NXR0 463 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 FAM43BQ6ZT52 329 aaPredicted RBP21.48■■□□□ 1.03
LIMS2-201ENST00000324938 BBS5Q8N3I7 341 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 FBXO22Q8NEZ5 403 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 CEP70Q8NHQ1 597 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 PYDC1Q8WXC3 89 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 TRIB3Q96RU7 358 aa21.48■■□□□ 1.03
LIMS2-201ENST00000324938 SUDS3Q9H7L9 328 aaPredicted RBP21.48■■□□□ 1.03
LIMS2-201ENST00000324938 COPG1Q9Y678 874 aaKnown RBP21.48■■□□□ 1.03
LIMS2-201ENST00000324938 TBKBP1A7MCY6 615 aa21.47■■□□□ 1.03
LIMS2-201ENST00000324938 CD3EAPO15446 510 aaKnown RBP21.47■■□□□ 1.03
LIMS2-201ENST00000324938 NDST3O95803 873 aa21.47■■□□□ 1.03
LIMS2-201ENST00000324938 MRPS35P82673 323 aaKnown RBP21.47■■□□□ 1.03
LIMS2-201ENST00000324938 KLC1Q07866 573 aa21.47■■□□□ 1.03
LIMS2-201ENST00000324938 TCHHL1Q5QJ38 904 aaPredicted RBP21.47■■□□□ 1.03
LIMS2-201ENST00000324938 GPR158Q5T848 1215 aa21.47■■□□□ 1.03
LIMS2-201ENST00000324938 MRNIPQ6NTE8 343 aa21.47■■□□□ 1.03
LIMS2-201ENST00000324938 DHDDSQ86SQ9 333 aa21.47■■□□□ 1.03
LIMS2-201ENST00000324938 REM2Q8IYK8 340 aaPredicted RBP21.47■■□□□ 1.03
LIMS2-201ENST00000324938 PELI3Q8N2H9 469 aa21.47■■□□□ 1.03
LIMS2-201ENST00000324938 AFAP1L2Q8N4X5 818 aa21.47■■□□□ 1.03
LIMS2-201ENST00000324938 MIEF2Q96C03 454 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms