RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 NDST2P52849 883 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 LILRA4P59901 499 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 KIF19Q2TAC6 998 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 ZNF786Q8N393 782 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 CPSF7Q8N684 471 aaKnown RBP12.13□□□□□ -0.47
NLRC3-201ENST00000324659 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
NLRC3-201ENST00000324659 LRCH3Q96II8 777 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 VPS50Q96JG6 964 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 TEKT5Q96M29 485 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 ZNF560Q96MR9 790 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 FSD1LQ9BXM9 530 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 MRPL46Q9H2W6 279 aaKnown RBP12.13□□□□□ -0.47
NLRC3-201ENST00000324659 ZNF385DQ9H6B1 395 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 TMEM30AQ9NV96 361 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 TBCCD1Q9NVR7 557 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 CACNA2D2Q9NY47 1150 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 V9GYQ6 96 aa12.13□□□□□ -0.47
NLRC3-201ENST00000324659 C17orf102A2RUQ5 167 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 KDM1AO60341 852 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 GNAO1P09471 354 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 LRPAP1P30533 357 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 CXCR3P49682 368 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 CDH13P55290 713 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 APOFQ13790 326 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 IQSEC1Q6DN90 963 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 GPR141Q7Z602 305 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 IFNEQ86WN2 208 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 CENPSQ8N2Z9 138 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 HMGCLL1Q8TB92 370 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 ASB9Q96DX5 294 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 CDC14AQ9UNH5 594 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 ANKRD6Q9Y2G4 727 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 PRRC2BQ5JSZ5 2229 aaKnown RBP12.12□□□□□ -0.47
NLRC3-201ENST00000324659 MYBPHLA2RUH7 354 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 PIRO00625 290 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 SLC4A1P02730 911 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 FUCA1P04066 466 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 HSPA13P48723 471 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 SCNN1GP51170 649 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 RPL26P61254 145 aaKnown RBP12.12□□□□□ -0.47
NLRC3-201ENST00000324659 FAM83EQ2M2I3 478 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 ARL13BQ3SXY8 428 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 FBXO48Q5FWF7 155 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 THOC7Q6I9Y2 204 aaKnown RBP12.12□□□□□ -0.47
NLRC3-201ENST00000324659 CHERPQ8IWX8 916 aaKnown RBP12.12□□□□□ -0.47
NLRC3-201ENST00000324659 SPPL2BQ8TCT7 592 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 CANT1Q8WVQ1 401 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 RMND5BQ96G75 393 aaPredicted RBP12.12□□□□□ -0.47
NLRC3-201ENST00000324659 ZNF419Q96HQ0 510 aaPredicted RBP12.12□□□□□ -0.47
NLRC3-201ENST00000324659 TBL1YQ9BQ87 522 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 COLEC11Q9BWP8 271 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 NACA2Q9H009 215 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 CNOT6Q9ULM6 557 aaKnown RBP12.12□□□□□ -0.47
NLRC3-201ENST00000324659 MAGEB16A2A368 324 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 TRPC5OSA6NMA1 111 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 SUPT7LO94864 414 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 THPOP40225 353 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 BCAP31P51572 246 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 CUZD1Q86UP6 607 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 ARRDC4Q8NCT1 418 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 SHCBP1Q8NEM2 672 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 RDH11Q8TC12 318 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 SLCO4A1Q96BD0 722 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 DSEQ9UL01 958 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 IPPQ9Y573 584 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 FADS3Q9Y5Q0 445 aa12.12□□□□□ -0.47
NLRC3-201ENST00000324659 C1orf232A0A0U1RR37 186 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 TTC24A2A3L6 582 aaPredicted RBP12.11□□□□□ -0.47
NLRC3-201ENST00000324659 SLCO1B7G3V0H7 640 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 NR5A2O00482 541 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 SOCS2O14508 198 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 MT-ND1P03886 318 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 PCYT1AP49585 367 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 CDK9P50750 372 aaKnown RBP12.11□□□□□ -0.47
NLRC3-201ENST00000324659 CLCN2P51788 898 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 ITKQ08881 620 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 BNIP3Q12983 259 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 CAPRIN1Q14444 709 aaKnown RBP12.11□□□□□ -0.47
NLRC3-201ENST00000324659 GPR107Q5VW38 600 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 PKN3Q6P5Z2 889 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 SAPCD2Q86UD0 394 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 PPHLN1Q8NEY8 458 aaKnown RBP12.11□□□□□ -0.47
NLRC3-201ENST00000324659 GPR78Q96P69 363 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 HNRNPABQ99729 332 aaKnown RBP12.11□□□□□ -0.47
NLRC3-201ENST00000324659 SPC25Q9HBM1 224 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 SPAG4Q9NPE6 437 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 VPS51Q9UID3 782 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 FBXW11Q9UKB1 542 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 MYRFQ9Y2G1 1151 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 TMEM98Q9Y2Y6 226 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 GPC6Q9Y625 555 aaPredicted RBP12.11□□□□□ -0.47
NLRC3-201ENST00000324659 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 SRP72O76094 671 aaKnown RBP12.11□□□□□ -0.47
NLRC3-201ENST00000324659 CD4P01730 458 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 STX5Q13190 355 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 FSCN1Q16658 493 aaKnown RBP12.11□□□□□ -0.47
NLRC3-201ENST00000324659 LDLRAD1Q5T700 205 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 SPRYD7Q5W111 196 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 HMBOX1Q6NT76 420 aa12.11□□□□□ -0.47
NLRC3-201ENST00000324659 ATPAF2Q8N5M1 289 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms