RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 FAM129BQ96TA1 746 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 SYT15Q9BQS2 421 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF559Q9BR84 538 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 LRRC61Q9BV99 259 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 SLC13A1Q9BZW2 595 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 ELOVL4Q9GZR5 314 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 LCMT1Q9UIC8 334 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 GGA2Q9UJY4 613 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 FLNAP21333 2647 aaKnown RBP6.73□□□□□ -1.33
CSTF3-201ENST00000323959 SCN1AP35498 2009 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 IGHV5-10-1A0A0J9YXX1 117 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 PROM1O43490 865 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 PHACTR2O75167 634 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 FAM163BP0C2L3 166 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 HARSP12081 509 aaKnown RBP6.73□□□□□ -1.33
CSTF3-201ENST00000323959 BDNFP23560 247 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 TSFMP43897 325 aaKnown RBP6.73□□□□□ -1.33
CSTF3-201ENST00000323959 CCL11P51671 97 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 CENPCQ03188 943 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 NR1D2Q14995 579 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 ZACNQ401N2 412 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 MPPE1Q53F39 396 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 ANKS6Q68DC2 871 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 TADA2BQ86TJ2 420 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 SLC47A2Q86VL8 602 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 GKN2Q86XP6 184 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 FAM71AQ8IYT1 594 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 GPR156Q8NFN8 814 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 OR4D9Q8NGE8 314 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 PLEKHO2Q8TD55 490 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 SHC3Q92529 594 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 NOX5Q96PH1 765 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 CBWD1Q9BRT8 395 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 CPSF3Q9UKF6 684 aaKnown RBP6.73□□□□□ -1.33
CSTF3-201ENST00000323959 GPR34Q9UPC5 381 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 DOLKQ9UPQ8 538 aa6.73□□□□□ -1.33
CSTF3-201ENST00000323959 LRRIQ3A6PVS8 624 aaPredicted RBP6.72□□□□□ -1.33
CSTF3-201ENST00000323959 KIF5CO60282 957 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 TLR5O60602 858 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 GZMAP12544 262 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 ATP5C1P36542 298 aaKnown RBP6.72□□□□□ -1.33
CSTF3-201ENST00000323959 RBMXP38159 391 aaKnown RBP6.72□□□□□ -1.33
CSTF3-201ENST00000323959 KLK7P49862 253 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 KIF11P52732 1056 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 B4GALNT1Q00973 533 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 CBWD6Q4V339 395 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 HSP90AA4PQ58FG1 418 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 CBWD3Q5JTY5 395 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 CBWD5Q5RIA9 395 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 MAEAQ7L5Y9 396 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 NRSN1Q8IZ57 195 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 TMEM130Q8N3G9 435 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 CHP1Q99653 195 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 SLX1AQ9BQ83 275 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 ZHX3Q9H4I2 956 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 ASB7Q9H672 318 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 GDAP2Q9NXN4 497 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 STMN3Q9NZ72 180 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 RNF14Q9UBS8 474 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 VPS51Q9UID3 782 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 L1RE1Q9UN81 338 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 PCDHGC4Q9Y5F7 938 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 PCDH17O14917 1159 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 CLIC2O15247 247 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 OGTO15294 1046 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 IGFBP2P18065 325 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 F8A1P23610 371 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 CA7P43166 264 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 ELAVL3Q14576 367 aaKnown RBP6.72□□□□□ -1.33
CSTF3-201ENST00000323959 AGBL4Q5VU57 503 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 CPZQ66K79 652 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 JADE1Q6IE81 842 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 OGFOD3Q6PK18 319 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 C6orf15Q6UXA7 325 aaPredicted RBP6.72□□□□□ -1.33
CSTF3-201ENST00000323959 C16orf47Q6ZP98 133 aaPredicted RBP6.72□□□□□ -1.33
CSTF3-201ENST00000323959 Q6ZS92 163 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 TECPR1Q7Z6L1 1165 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 TTC39CQ8N584 583 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 FBXL13Q8NEE6 735 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 WFDC11Q8NEX6 87 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 TRIM58Q8NG06 486 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 ZMYND19Q96E35 227 aaPredicted RBP6.72□□□□□ -1.33
CSTF3-201ENST00000323959 CCDC42Q96M95 316 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 ING2Q9H160 280 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 MMRN2Q9H8L6 949 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 GPR83Q9NYM4 423 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 TRPS1Q9UHF7 1281 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 FARP1Q9Y4F1 1045 aaPredicted RBP6.72□□□□□ -1.33
CSTF3-201ENST00000323959 PCDHA13Q9Y5I0 950 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 MRFAP1Q9Y605 127 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 ZGRF1Q86YA3 2104 aa6.72□□□□□ -1.33
CSTF3-201ENST00000323959 A0A1W2PQU0 124 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 PIPSLA2A3N6 862 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 F8VP50 259 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 ALOX15BO15296 676 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 SLC31A1O15431 190 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 GCATO75600 419 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 IPO13O94829 963 aaKnown RBP6.71□□□□□ -1.33
CSTF3-201ENST00000323959 TUBBP07437 444 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 SLC9A1P19634 815 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms