RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 TLL1O43897 1013 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 SNAP91O60641 907 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 CBX6O95503 412 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 GOT2P00505 430 aaKnown RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 OGNP20774 298 aaKnown RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 MZF1P28698 734 aaPredicted RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 ZNF460Q14592 562 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 TAF1AQ15573 450 aaPredicted RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 HSF5Q4G112 596 aaPredicted RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 FSCBQ5H9T9 825 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 C9orf50Q5SZB4 431 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 RBM20Q5T481 1227 aaKnown RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 HECTD2Q5U5R9 776 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 SDCCAG8Q86SQ7 713 aaPredicted RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 FSTL5Q8N475 847 aaPredicted RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.06■□□□□ 0.32
SSR4-201ENST00000320857 DCAF4L2Q8NA75 395 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 NXNL1Q96CM4 212 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 NSL1Q96IY1 281 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 RILPQ96NA2 401 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 MRPL57Q9BQC6 102 aaKnown RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 NLE1Q9NVX2 485 aaPredicted RBP17.06■□□□□ 0.32
SSR4-201ENST00000320857 DNAJC28Q9NX36 388 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 CFAP97Q9P2B7 532 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 VWA7Q9Y334 891 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 OR51B4Q9Y5P0 310 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 RAI2Q9Y5P3 530 aa17.06■□□□□ 0.32
SSR4-201ENST00000320857 CEP290O15078 2479 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 CCDC162PA2VCL2 907 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 LCHNA4D1U4 455 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 C2orf81A6NN90 581 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.05■□□□□ 0.32
SSR4-201ENST00000320857 TK2O00142 265 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 CCL22O00626 93 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 TRAFD1O14545 582 aaPredicted RBP17.05■□□□□ 0.32
SSR4-201ENST00000320857 SCAMP3O14828 347 aaKnown RBP17.05■□□□□ 0.32
SSR4-201ENST00000320857 CD160O95971 181 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 GLUD1P00367 558 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 ALOX15P16050 662 aaPredicted RBP17.05■□□□□ 0.32
SSR4-201ENST00000320857 CSKP41240 450 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 GLRBP48167 497 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 ERVFC1P60507 584 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 ZXDBP98169 803 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 SHHQ15465 462 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 FAM83EQ2M2I3 478 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 MPPE1Q53F39 396 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 ZNF789Q5FWF6 425 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 AGAP9Q5VTM2 703 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 FAM45BPQ6NSW5 357 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 NCEH1Q6PIU2 408 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 LINGO4Q6UY18 593 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 ALYREFQ86V81 257 aaKnown RBP17.05■□□□□ 0.32
SSR4-201ENST00000320857 RNF135Q8IUD6 432 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 MFN1Q8IWA4 741 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 PARP9Q8IXQ6 854 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 TMEM151AQ8N4L1 468 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 TDRD5Q8NAT2 981 aaKnown RBP17.05■□□□□ 0.32
SSR4-201ENST00000320857 OR4L1Q8NH43 312 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 FAM45AQ8TCE6 357 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 GPR78Q96P69 363 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 NDNQ99608 321 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 TCF25Q9BQ70 676 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 GATA5Q9BWX5 397 aaPredicted RBP17.05■□□□□ 0.32
SSR4-201ENST00000320857 MRPL46Q9H2W6 279 aaKnown RBP17.05■□□□□ 0.32
SSR4-201ENST00000320857 ASAH2Q9NR71 780 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 CATSPERZQ9NTU4 200 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 MARCH4Q9P2E8 410 aaPredicted RBP17.05■□□□□ 0.32
SSR4-201ENST00000320857 XPR1Q9UBH6 696 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 LHX3Q9UBR4 397 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 NUMBLQ9Y6R0 609 aa17.05■□□□□ 0.32
SSR4-201ENST00000320857 OR51F1A6NGY5 319 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 MGRN1O60291 552 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 PRLP01236 227 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 PIRTP0C851 137 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 PTPN4P29074 926 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 HNRNPH1P31943 449 aaKnown RBP17.04■□□□□ 0.32
SSR4-201ENST00000320857 CTNNB1P35222 781 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 ZNF140P52738 457 aaPredicted RBP17.04■□□□□ 0.32
SSR4-201ENST00000320857 RHOAP61586 193 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 TBCCQ15814 346 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 MPP7Q5T2T1 576 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 RETSATQ6NUM9 610 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 KLC3Q6P597 504 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 CHRDL2Q6WN34 429 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 GLT6D1Q7Z4J2 308 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 LPCAT1Q8NF37 534 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 OR13C4Q8NGS5 318 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 DDI1Q8WTU0 396 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 HEXDCQ8WVB3 486 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 NSMCE3Q96MG7 304 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 OLFM1Q99784 485 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 GDF15Q99988 308 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 C2orf49Q9BVC5 232 aaPredicted RBP17.04■□□□□ 0.32
SSR4-201ENST00000320857 NMUR2Q9GZQ4 415 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 PNPOQ9NVS9 261 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 VPS51Q9UID3 782 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 SORCS3Q9UPU3 1222 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 APOBEC2Q9Y235 224 aaKnown RBP17.04■□□□□ 0.32
SSR4-201ENST00000320857 RWDD3Q9Y3V2 267 aa17.04■□□□□ 0.32
SSR4-201ENST00000320857 DENND4CQ5VZ89 1909 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms