RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 TRMT2BQ96GJ1 504 aaKnown RBP13.14□□□□□ -0.31
CPNE1-201ENST00000317677 COX4I2Q96KJ9 171 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 ZBP1Q9H171 429 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 VPS11Q9H270 941 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 ZNF696Q9H7X3 374 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 LRRC40Q9H9A6 602 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 CXXC1Q9P0U4 656 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-201ENST00000317677 SLC17A7Q9P2U7 560 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 PPM1HQ9ULR3 514 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 PSAT1Q9Y617 370 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 TMEM265A0A087WTH1 108 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 IQANK1A0A1B0GTG1 560 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 NRG2O14511 850 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-201ENST00000317677 RFPL1O75677 317 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 STC2O76061 302 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 BAG2O95816 211 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 F7P08709 466 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-201ENST00000317677 HTRA4P83105 476 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-201ENST00000317677 SLC10A7Q0GE19 358 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 INAQ16352 499 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 ZNF423Q2M1K9 1284 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 ZNF362Q5T0B9 420 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-201ENST00000317677 TTC39BQ5VTQ0 682 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-201ENST00000317677 TIGD7Q6NT04 549 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-201ENST00000317677 CDHR3Q6ZTQ4 885 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 RAPH1Q70E73 1250 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 TMEM135Q86UB9 458 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 TCEAL8Q8IYN2 117 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 LGI2Q8N0V4 545 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 AHI1Q8N157 1196 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 PGBD5Q8N414 524 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 CEP70Q8NHQ1 597 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 RFWD2Q8NHY2 731 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 SLC22A12Q96S37 553 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 TTC1Q99614 292 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 IL21Q9HBE4 155 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 INSL5Q9Y5Q6 135 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 C15orf38-AP3S2A0A0A6YYH1 394 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 CAPN14A8MX76 684 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 B2RBV5 119 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 FGF18O76093 207 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 MT-ND3P03897 115 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 ALDH1A3P47895 512 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 KPNA1P52294 538 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-201ENST00000317677 MYLK3Q32MK0 819 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 KDELC1Q6UW63 502 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 ARPINQ7Z6K5 226 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 DNAJB7Q7Z6W7 309 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-201ENST00000317677 LRRC49Q8IUZ0 686 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 ULK2Q8IYT8 1036 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 METTL25Q8N6Q8 603 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 IPMKQ8NFU5 416 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 FATE1Q969F0 183 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 MFSD3Q96ES6 412 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 MRGPRX2Q96LB1 330 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 ZNF778Q96MU6 729 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 KLF16Q9BXK1 252 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-201ENST00000317677 KCNK13Q9HB14 408 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 TRPM5Q9NZQ8 1165 aa13.13□□□□□ -0.31
CPNE1-201ENST00000317677 SCHIP1Q9P0W5 487 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-201ENST00000317677 TTC24A2A3L6 582 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 FBP2O00757 339 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 PGM3O95394 542 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 F11P03951 625 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 MMP2P08253 660 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 SNRPAP09012 282 aaKnown RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 CNPP09543 421 aaKnown RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ERVK-10P10266 1014 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ADRA1DP25100 572 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 NR1H2P55055 460 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 MAXP61244 160 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ZXDBP98169 803 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 DLG1Q12959 904 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 SPANXN3Q5MJ09 141 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 LVRNQ6Q4G3 990 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 DENND1CQ8IV53 801 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 TEX26Q8N6G2 289 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 DNAAF3Q8N9W5 541 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ADAMTS19Q8TE59 1207 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ZNF669Q96BR6 464 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 CERS2Q96G23 380 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 CDK5RAP1Q96SZ6 601 aaKnown RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 TBL1YQ9BQ87 522 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 NAT9Q9BTE0 207 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 FICDQ9BVA6 458 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 CHRAC1Q9NRG0 131 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 MRPL17Q9NRX2 175 aaKnown RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 BFARQ9NZS9 450 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 SLC7A8Q9UHI5 535 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 FAF1Q9UNN5 650 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 LZTS1Q9Y250 596 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 TDRKHQ9Y2W6 561 aaKnown RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ACTL7AQ9Y615 435 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 IKBKGQ9Y6K9 419 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ZFP37Q9Y6Q3 630 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 MYO9BQ13459 2157 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 SOBPA7XYQ1 873 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms