RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 OPTCQ9UBM4 332 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 MTMR11A4FU01 709 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 DGKAP23743 735 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 LRRC74AQ0VAA2 488 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 TRMT11Q7Z4G4 463 aaKnown RBP6.21□□□□□ -1.42
PRKDC-201ENST00000314191 ZNHIT2Q9UHR6 403 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 HLA-DQB2P05538 268 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 ITGB1P05556 798 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 COL6A2P12110 1019 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 NDST2P52849 883 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 HIST2H2ACQ16777 129 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-201ENST00000314191 PGS1Q32NB8 556 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 MORN1Q5T089 497 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 HIST2H2AA3Q6FI13 130 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 AFTPHQ6ULP2 937 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 ZYG11AQ6WRX3 759 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 AMIGO2Q86SJ2 522 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 DHFR2Q86XF0 187 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CLYBLQ8N0X4 340 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 TMEM199Q8N511 208 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 SEMA6AQ9H2E6 1030 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 YY1AP1Q9H869 796 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 FKBPLQ9UIM3 349 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 INPP4BO15327 924 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 HTR7P34969 479 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 IDH3AP50213 366 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 PHEXP78562 749 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 STARD3Q14849 445 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 UPP1Q16831 310 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF778Q96MU6 729 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 POLG2Q9UHN1 485 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 USP54Q70EL1 1684 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 NDST3O95803 873 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 KRT6AP02538 564 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CHRNA1P02708 482 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 KRT6BP04259 564 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF23P17027 643 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 KRT6CP48668 564 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 PLPP4Q5VZY2 271 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 RNF19BQ6ZMZ0 732 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CUZD1Q86UP6 607 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 PNPLA1Q8N8W4 532 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 LINGO1Q96FE5 620 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 SPATA17Q96L03 361 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 FCRL3Q96P31 734 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-201ENST00000314191 SLC2A13Q96QE2 648 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 SPASTQ9UBP0 616 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 A0A1B0GVM2 712 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 TCAF2A6NFQ2 919 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 PFKPQ01813 784 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 MS4A13Q5J8X5 152 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 RALGPS1Q5JS13 557 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 KIAA0930Q6ICG6 404 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-201ENST00000314191 NUDT18Q6ZVK8 323 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 TNKS2Q9H2K2 1166 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CNTRLQ7Z7A1 2325 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 SIN3BO75182 1162 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CCR10P46092 362 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CCNG1P51959 295 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CACNA2D1P54289 1103 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 SNRPD1P62314 119 aaKnown RBP6.21□□□□□ -1.42
PRKDC-201ENST00000314191 ZBTB6Q15916 424 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CST9Q5W186 159 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 ULK2Q8IYT8 1036 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 PGBD3Q8N328 593 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 HAPLN3Q96S86 360 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 GPR21Q99679 349 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 OSBPL2Q9H1P3 480 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 ARL15Q9NXU5 204 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 YIPF1Q9Y548 306 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 NHSL1Q5SYE7 1610 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 HSPA1AP0DMV8 641 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 HSPA1BP0DMV9 641 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 HAPLN1P10915 354 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SEMG2Q02383 582 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 MAGEH1Q9H213 219 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 IGFLR1Q9H665 355 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 IRAK4Q9NWZ3 460 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PEX1O43933 1283 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ACVRL1P37023 503 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PTDSS1P48651 473 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 KHDC1Q4VXA5 237 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 USP45Q70EL2 814 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PPP2R3CQ969Q6 453 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 TBCDQ9BTW9 1192 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ASPSCR1Q9BZE9 553 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 RFPL1O75677 317 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ATP6V1B2P21281 511 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PIK3CGP48736 1102 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 GALNT2Q10471 571 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 AP1ARQ63HQ0 302 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 NET1Q7Z628 596 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 FAM156AQ8NDB6 213 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 DNAJB14Q8TBM8 379 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 MCOLN3Q8TDD5 553 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 MOCOSQ96EN8 888 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 RPL10LQ96L21 214 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 NPAS2Q99743 824 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 BBS2Q9BXC9 721 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 APPL1Q9UKG1 709 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms