RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 HIPK3Q9H422 1215 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZDHHC4Q9NPG8 344 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF536O15090 1300 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 IDH3BO43837 385 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 DNAJB13P59910 316 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 PPARDQ03181 441 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SLC5A9Q2M3M2 681 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 RNASEH2BQ5TBB1 312 aaKnown RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 RNFT2Q96EX2 444 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF514Q96K75 400 aaPredicted RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 KLHL31Q9H511 634 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 LRRC4CQ9HCJ2 640 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 CDH22Q9UJ99 828 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SSR3Q9UNL2 185 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 EIF3FO00303 357 aaPredicted RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ANXA5P08758 320 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 CPB1P15086 417 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 TAF1P21675 1872 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 CDKN2BP42772 138 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 GMPSP49915 693 aaPredicted RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 PSMD4P55036 377 aaKnown RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 IFI35P80217 286 aaPredicted RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 FOLH1Q04609 750 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SMTNL2Q2TAL5 461 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 HACD2Q6Y1H2 254 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 CARNMT1Q8N4J0 409 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF317Q96PQ6 595 aaPredicted RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 VPS4AQ9UN37 437 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 GABRDO14764 452 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZBTB14O43829 449 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 MICAL2O94851 1124 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 CHRM3P20309 590 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 RCVRNP35243 200 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 MLH1P40692 756 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 NDST2P52849 883 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 LCP2Q13094 533 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 CNPY1Q3B7I2 92 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZBED5Q49AG3 693 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 NIPAL1Q6NVV3 410 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 BORAQ6PGQ7 559 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SHQ1Q6PI26 577 aaKnown RBP8.86□□□□□ -0.99
COL6A5-202ENST00000312481 DENND5BQ6ZUT9 1274 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 PPTC7Q8NI37 304 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SGF29Q96ES7 293 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 CCDC142Q17RM4 750 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SMU1Q2TAY7 513 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF618Q5T7W0 954 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 THAP5Q7Z6K1 395 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 BANPQ8N9N5 519 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 ZHX1-C8orf76Q96EF9 292 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 SIK2Q9H0K1 926 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 INPP5FQ9Y2H2 1132 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 GIT1Q9Y2X7 761 aa8.86□□□□□ -0.99
COL6A5-202ENST00000312481 TPP1O14773 563 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 GRIN3BO60391 1043 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 SYNCRIPO60506 623 aaKnown RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 SNAP25P60880 206 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CYP2A13Q16696 494 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF470Q6ECI4 717 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 EIF5AL1Q6IS14 154 aaKnown RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 METTL6Q8TCB7 284 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 SLC22A17Q8WUG5 538 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ZUFSPQ96AP4 578 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ZYG11BQ9C0D3 744 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ROGDIQ9GZN7 287 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ADAMTS10Q9H324 1103 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ATP13A1Q9HD20 1204 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 XPNPEP3Q9NQH7 507 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 PAK6Q9NQU5 681 aaPredicted RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 FAM186AA6NE01 2351 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CYB561D2O14569 222 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 GUCA1AP43080 201 aaPredicted RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 TMBIM6P55061 237 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 TTLQ8NG68 377 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 DUSP16Q9BY84 665 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 GPN1Q9HCN4 374 aaPredicted RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 COPZ2Q9P299 210 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 DAPK2Q9UIK4 370 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 AP4B1Q9Y6B7 739 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 SLC7A4O43246 635 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CBSLP0DN79 551 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ATP6V1B2P21281 511 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CCNCP24863 283 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CBSP35520 551 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 IL31Q6EBC2 164 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 FAM13CQ8NE31 585 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 TRPV1Q8NER1 839 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 EVA1BQ9NVM1 165 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 AIREO43918 545 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CLTBP09497 229 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 FLT3P36888 993 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CASP4P49662 377 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 PITPNAQ00169 270 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 KIAA0930Q6ICG6 404 aaPredicted RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ZC3H7AQ8IWR0 971 aaKnown RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 STYXQ8WUJ0 223 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 FBXO32Q969P5 355 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 NDNQ99608 321 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 SPATC1LQ9H0A9 340 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 DMAC2Q9NW81 257 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms