RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GLP2RO95838 553 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 GOT2P00505 430 aaKnown RBP11.59□□□□□ -0.55
PTPN2-201ENST00000309660 NCF1P14598 390 aaPredicted RBP11.59□□□□□ -0.55
PTPN2-201ENST00000309660 KCNC1P48547 511 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 CLCN5P51795 746 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 SULT2A1Q06520 285 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 AGKQ53H12 422 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 TECRLQ5HYJ1 363 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 TMCO4Q5TGY1 634 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 C16orf89Q6UX73 402 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 TAS1R1Q7RTX1 841 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 LRRC49Q8IUZ0 686 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 DENND1CQ8IV53 801 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 CEP70Q8NHQ1 597 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 CD99L2Q8TCZ2 262 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 TSPAN17Q96FV3 270 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 DONSONQ9NYP3 566 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 AK5Q9Y6K8 562 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 LRRC14BA6NHZ5 514 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 ENO4A6NNW6 628 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 CBX4O00257 560 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 SLC11A1P49279 550 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 MTTPP55157 894 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 BTKQ06187 659 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 TAF12Q16514 161 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 AFMIDQ63HM1 303 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 FUT10Q6P4F1 479 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 PGM2L1Q6PCE3 622 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 C16orf59Q7L2K0 433 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 OR9I1Q8NGQ6 314 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 RP9Q8TA86 221 aaKnown RBP11.59□□□□□ -0.55
PTPN2-201ENST00000309660 ARRDC2Q8TBH0 407 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 FBRSL1Q9HCM7 1045 aaKnown RBP11.59□□□□□ -0.55
PTPN2-201ENST00000309660 SMPD4Q9NXE4 827 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 GIMAP2Q9UG22 337 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 CORO1CQ9ULV4 474 aaPredicted RBP11.59□□□□□ -0.55
PTPN2-201ENST00000309660 CCDC162PA2VCL2 907 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 TRPC5OSA6NMA1 111 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 TBKBP1A7MCY6 615 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 SLCO1B7G3V0H7 640 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 SDHDO14521 159 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 GFAPP14136 432 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 TACR2P21452 398 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 AQP4P55087 323 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 PDAP1Q13442 181 aaKnown RBP11.59□□□□□ -0.55
PTPN2-201ENST00000309660 PFKFB4Q16877 469 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 SFT2D3Q587I9 215 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 ARTNQ5T4W7 220 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 MSANTD2Q6P1R3 559 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 TMEM207Q6UWW9 146 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 GCNAQ96QF7 691 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 EFCAB1Q9HAE3 211 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 IL1RL2Q9HB29 575 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 GKN1Q9NS71 199 aa11.59□□□□□ -0.55
PTPN2-201ENST00000309660 PPP6CO00743 305 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 CD3EAPO15446 510 aaKnown RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 SERPINF2P08697 491 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 LINGO3P0C6S8 592 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 PRKAA2P54646 552 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 SERINC3Q13530 473 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 PTPRRQ15256 657 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 KIF19Q2TAC6 998 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 NADSYN1Q6IA69 706 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 KIAA0408Q6ZU52 694 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 LRRC8DQ7L1W4 858 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 AFAP1L2Q8N4X5 818 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 BHLHE22Q8NFJ8 381 aaPredicted RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 NAT14Q8WUY8 206 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 SARS2Q9NP81 518 aaKnown RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 PTGDR2Q9Y5Y4 395 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 ZFP37Q9Y6Q3 630 aaPredicted RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 UBDO15205 165 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 ADAM12O43184 909 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 GJB5O95377 273 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 S1PR4O95977 384 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 RBP1P09455 135 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 SP100P23497 879 aaPredicted RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 LEPRP48357 1165 aaKnown RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 KIAA1841Q6NSI8 718 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 DDIASQ8IXT1 998 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 JADE3Q92613 823 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 CCDC68Q9H2F9 335 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 EML4Q9HC35 981 aaKnown RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 MRM3Q9HC36 420 aaKnown RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 ZBTB26Q9HCK0 441 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 NYNRINQ9P2P1 1898 aaKnown RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 A0A1W2PQ45 241 aaPredicted RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 A0A1W2PQY0 241 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 CAPN8A6NHC0 703 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 SYN3O14994 580 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 LDB2O43679 373 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 SMIM24O75264 130 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 RTN3O95197 1032 aaPredicted RBP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 FMO4P31512 558 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 SOX11P35716 441 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 IL10RBQ08334 325 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 NSUN2Q08J23 767 aaKnown RBP eCLIP11.58□□□□□ -0.56
PTPN2-201ENST00000309660 RALGDSQ12967 914 aa11.58□□□□□ -0.56
PTPN2-201ENST00000309660 CEACAM7Q14002 265 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms