RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LDB1Q86U70 411 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-201ENST00000309469 TMEM151AQ8N4L1 468 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 PNPLA1Q8N8W4 532 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 GPR150Q8NGU9 434 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 OR6Y1Q8NGX8 325 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 FIBINQ8TAL6 211 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 RDH11Q8TC12 318 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 NDNQ99608 321 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 NLE1Q9NVX2 485 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-201ENST00000309469 KCNK4Q9NYG8 393 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-201ENST00000309469 KIAA1522Q9P206 1035 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-201ENST00000309469 CD3EAPO15446 510 aaKnown RBP21.34■■□□□ 1.01
ATG4D-201ENST00000309469 DDX6P26196 483 aaKnown RBP eCLIP21.34■■□□□ 1.017e-8■■□□□ 12.4
ATG4D-201ENST00000309469 IRS1P35568 1242 aa21.34■■□□□ 1.01
ATG4D-201ENST00000309469 RALGPS1Q5JS13 557 aa21.34■■□□□ 1.01
ATG4D-201ENST00000309469 FBXW10Q5XX13 1052 aa21.34■■□□□ 1.01
ATG4D-201ENST00000309469 MTDHQ86UE4 582 aaKnown RBP21.34■■□□□ 1.01
ATG4D-201ENST00000309469 CMTM8Q8IZV2 173 aa21.34■■□□□ 1.01
ATG4D-201ENST00000309469 MDGA1Q8NFP4 955 aa21.34■■□□□ 1.01
ATG4D-201ENST00000309469 ACDQ96AP0 544 aa21.34■■□□□ 1.01
ATG4D-201ENST00000309469 CDKN2AIPNLQ96HQ2 116 aa21.34■■□□□ 1.01
ATG4D-201ENST00000309469 MTIF3Q9H2K0 278 aaKnown RBP21.34■■□□□ 1.01
ATG4D-201ENST00000309469 CPSF2Q9P2I0 782 aaKnown RBP21.34■■□□□ 1.01
ATG4D-201ENST00000309469 HEY2Q9UBP5 337 aa21.34■■□□□ 1.01
ATG4D-201ENST00000309469 CCL26Q9Y258 94 aa21.34■■□□□ 1.01
ATG4D-201ENST00000309469 ANKRD66B4E2M5 251 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 C5orf67F2Z3F1 127 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 K7ERQ8 282 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 MOSPD3O75425 235 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 LYPLA1O75608 230 aaPredicted RBP21.33■■□□□ 1.01
ATG4D-201ENST00000309469 KLHL2O95198 593 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 KITP10721 976 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 ZNF140P52738 457 aaPredicted RBP21.33■■□□□ 1.01
ATG4D-201ENST00000309469 NCALDP61601 193 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 LMAN2Q12907 356 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 CAMK1Q14012 370 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 TEAD2Q15562 447 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 MRNIPQ6NTE8 343 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 GLT6D1Q7Z4J2 308 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 OR4L1Q8NH43 312 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 SREK1Q8WXA9 508 aaKnown RBP21.33■■□□□ 1.01
ATG4D-201ENST00000309469 SCYL1Q96KG9 808 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 GPR78Q96P69 363 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 OLFM1Q99784 485 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 MCOLN1Q9GZU1 580 aa21.33■■□□□ 1.01
ATG4D-201ENST00000309469 MARCOQ9UEW3 520 aaPredicted RBP21.33■■□□□ 1.01
ATG4D-201ENST00000309469 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.33■■□□□ 1
ATG4D-201ENST00000309469 GRM6O15303 877 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 DNAJC6O75061 913 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 CYBBP04839 570 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 SBK3P0C264 359 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 GLRBP48167 497 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 ATXN7L2Q5T6C5 722 aaPredicted RBP21.33■■□□□ 1
ATG4D-201ENST00000309469 HECTD2Q5U5R9 776 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 FSTL5Q8N475 847 aaPredicted RBP21.33■■□□□ 1
ATG4D-201ENST00000309469 PDCD6IPQ8WUM4 868 aaKnown RBP21.33■■□□□ 1
ATG4D-201ENST00000309469 NXNL1Q96CM4 212 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 TSPAN17Q96FV3 270 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 SMIM14Q96QK8 99 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 ZFP69BQ9UJL9 534 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 VWA7Q9Y334 891 aa21.33■■□□□ 1
ATG4D-201ENST00000309469 C2orf81A6NN90 581 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 TRIM13O60858 407 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 ARHGEF15O94989 841 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 RHOP08100 348 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 EPCAMP16422 314 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 PSMA3P25788 255 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 HOXA9P31269 272 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 SLC8A1P32418 973 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 CD70P32970 193 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 ABCE1P61221 599 aaKnown RBP21.32■■□□□ 1
ATG4D-201ENST00000309469 SLC20A2Q08357 652 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 ILF2Q12905 390 aaKnown RBP21.32■■□□□ 1
ATG4D-201ENST00000309469 DLG1Q12959 904 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 TSNAXIP1Q2TAA8 658 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 ARHGAP15Q53QZ3 475 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 SPDYAQ5MJ70 313 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 LRRC8EQ6NSJ5 796 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 ZYG11AQ6WRX3 759 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 PACS2Q86VP3 889 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 OR4K2Q8NGD2 314 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 SLC40A1Q9NP59 571 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 CATSPERZQ9NTU4 200 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 OXSMQ9NWU1 459 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 DNAJC16Q9Y2G8 782 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 DENND4CQ5VZ89 1909 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 ALPK3Q96L96 1907 aa21.32■■□□□ 1
ATG4D-201ENST00000309469 TK2O00142 265 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 CLASP2O75122 1294 aaKnown RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 RB1P06400 928 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 MYOGP15173 224 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 SKIV2L2P42285 1042 aaKnown RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 AP1S1P61966 158 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 HSF5Q4G112 596 aaPredicted RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 ATG14Q6ZNE5 492 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 SDCCAG8Q86SQ7 713 aaPredicted RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 TBC1D1Q86TI0 1168 aaPredicted RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 SPATA6LQ8N4H0 392 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 PIWIL2Q8TC59 973 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms