RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 XPAP23025 273 aaPredicted RBP19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 INSM1Q01101 510 aaPredicted RBP19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 GBE1Q04446 702 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 ZNF235Q14590 738 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 PDK2Q15119 407 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 TCEAL1Q15170 157 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 PHACTR4Q8IZ21 702 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 TC2NQ8N9U0 490 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 FATE1Q969F0 183 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 TBATAQ96M53 351 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 C1QTNF7Q9BXJ2 289 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 B4GALT6Q9UBX8 382 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 ARHGEF17Q96PE2 2063 aaPredicted RBP19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 AKR1B10O60218 316 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 RECQL5O94762 991 aaPredicted RBP19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 CELA2BP08218 269 aaPredicted RBP19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 LHCGRP22888 699 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 GJC1P36383 396 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 MMP13P45452 471 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 PEX5P50542 639 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 INPP5AQ14642 412 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 PTPRRQ15256 657 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 CNGA3Q16281 694 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 RALGPS1Q5JS13 557 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 LRRC49Q8IUZ0 686 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 CACTIN-AS1Q8N1I8 211 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 LRRN4Q8WUT4 740 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 COQ10AQ96MF6 247 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 TSGA13Q96PP4 275 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 MCCC1Q96RQ3 725 aaPredicted RBP19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 APOOQ9BUR5 198 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 PPIL1Q9Y3C6 166 aa19.91■□□□□ 0.78
PDZRN3-202ENST00000308537 NEMP2A6NFY4 417 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 H3BM21 787 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 TPP1O14773 563 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 KRT7P08729 469 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 KDELR1P24390 212 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 TRIM23P36406 574 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 SSR1P43307 286 aaKnown RBP19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 THOP1P52888 689 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 MTM1Q13496 603 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 PTK2BQ14289 1009 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 NFATC4Q14934 902 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 ALG11Q2TAA5 492 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 CFAP58Q5T655 872 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 MARC1Q5VT66 337 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 CDCP2Q5VXM1 449 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 PLD5Q8N7P1 536 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 DCBLD1Q8N8Z6 715 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 PIH1D2Q8WWB5 315 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 DUSP23Q9BVJ7 150 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 BOCQ9BWV1 1114 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 DEF6Q9H4E7 631 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 CCDC86Q9H6F5 360 aaKnown RBP19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 DTLQ9NZJ0 730 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 APOBEC3BQ9UH17 382 aaKnown RBP19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 OR1A2Q9Y585 309 aa19.9■□□□□ 0.78
PDZRN3-202ENST00000308537 LMO7DNF2Z398 122 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 PGLSO95336 258 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 PDHA1P08559 390 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 TSHRP16473 764 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 POLR2LP62875 67 aaKnown RBP19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 TARDBPQ13148 414 aaKnown RBP eCLIP19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 C1orf61Q13536 156 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 MESDQ14696 234 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 DEFB133Q30KQ1 61 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 ZCCHC8Q6NZY4 707 aaKnown RBP19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 CNGA4Q8IV77 575 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 PDCD7Q8N8D1 485 aaKnown RBP19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 KCTD6Q8NC69 237 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 ARRDC2Q8TBH0 407 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 LMX1AQ8TE12 382 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 CCDC42Q96M95 316 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 RNF157Q96PX1 679 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 SMIM14Q96QK8 99 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 NT5MQ9NPB1 228 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 SCUBE2Q9NQ36 999 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 ZNHIT6Q9NWK9 470 aaKnown RBP19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 LCMT1Q9UIC8 334 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 SALL4Q9UJQ4 1053 aa19.89■□□□□ 0.77
PDZRN3-202ENST00000308537 KIF26BQ2KJY2 2108 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 NPIPB15A6NHN6 443 aaPredicted RBP19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 TMEM110-MUSTN1A8MSY1 372 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 A8MX80 341 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 ZNF487B1APH4 448 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 AKR1B15C9JRZ8 316 aaPredicted RBP19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 MATN3O15232 486 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 CASC3O15234 703 aaKnown RBP19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 LZTS3O60299 673 aaPredicted RBP19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 HEXIM1O94992 359 aaKnown RBP19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 PCCBP05166 539 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 ELFN1P0C7U0 828 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 ALPPL2P10696 532 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 HK3P52790 923 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 DAB2P98082 770 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 CYP4F3Q08477 520 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 PRRT3Q5FWE3 981 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 SLC9A4Q6AI14 798 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 ESRP1Q6NXG1 681 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms