RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CEP41Q9BYV8 373 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 GRIP2Q9C0E4 1043 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 SIK2Q9H0K1 926 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZNF385DQ9H6B1 395 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 TBC1D23Q9NUY8 699 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 MID2Q9UJV3 735 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 A0A1W2PQH9 124 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 TNFRSF10BO14763 440 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 AIM2O14862 343 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 TRIM13O60858 407 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 BCAS2O75934 225 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 PARNO95453 639 aaKnown RBP10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 TBX18O95935 607 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 POLBP06746 335 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 XRCC1P18887 633 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 ADRA1BP35368 520 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 THOP1P52888 689 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 MRPS22P82650 360 aaKnown RBP10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 COG7P83436 770 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 MGAT5BQ3V5L5 792 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 PM20D1Q6GTS8 502 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 NAPRTQ6XQN6 538 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 SNX32Q86XE0 403 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 DCLK2Q8N568 766 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 DNAJC5GQ8N7S2 189 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 COLGALT1Q8NBJ5 622 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 STARD8Q92502 1023 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 EME1Q96AY2 570 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 HSPBAP1Q96EW2 488 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 CERS2Q96G23 380 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 CNBD2Q96M20 576 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 TOX2Q96NM4 488 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 CDRT15Q96T59 188 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 LGMNQ99538 433 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 RBBP8Q99708 897 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 OSBPL6Q9BZF3 934 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 ILKAPQ9H0C8 392 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 TKTL2Q9H0I9 626 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 WDCPQ9H6R7 721 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 MAN1C1Q9NR34 630 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 DTLQ9NZJ0 730 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 RAP2CQ9Y3L5 183 aa10.39□□□□□ -0.75
APOBEC3F-201ENST00000308521 CCDC160A6NGH7 325 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 MAGEB3O15480 346 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 ME2P23368 584 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 ARL4AP40617 200 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 LIMK2P53671 638 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 SESN2P58004 480 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 PDAP1Q13442 181 aaKnown RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 SEPT6Q14141 434 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 BTBD8Q5XKL5 378 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 NCBP2-AS2Q69YL0 99 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 FBXO46Q6PJ61 603 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 SCD5Q86SK9 330 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 DCP1BQ8IZD4 617 aaKnown RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 LILRA2Q8N149 483 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 GIPC2Q8TF65 315 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 RNF139Q8WU17 664 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 HAUS8Q9BT25 410 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 OSBPL10Q9BXB5 764 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 SEZ6LQ9BYH1 1024 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 DDX18Q9NVP1 670 aaKnown RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 PCDHGB4Q9UN71 923 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 PCDHGB5Q9Y5G0 923 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 SPO11Q9Y5K1 396 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 USP3Q9Y6I4 520 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 CEPT1Q9Y6K0 416 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 CEP290O15078 2479 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 ARHGEF37A1IGU5 675 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 FUOMA2VDF0 154 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 SYN3O14994 580 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 HDAC3O15379 428 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 MOCS2O96007 188 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 APOA4P06727 396 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 NFKBIAP25963 317 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 SERPINB5P36952 375 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 BCAP31P51572 246 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 CRADDP78560 199 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 DPYSQ14117 519 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZNF280DQ6N043 979 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 NIPAL1Q6NVV3 410 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 BNIPLQ7Z465 357 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 PLD6Q8N2A8 252 aaKnown RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 TMEM102Q8N9M5 508 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 RDH11Q8TC12 318 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 GIPC3Q8TF64 312 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 AUTS2Q8WXX7 1259 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 PRPF18Q99633 342 aaKnown RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 PKP2Q99959 881 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 VN1R3Q9BXE9 311 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 GBA3Q9H227 469 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 TPK1Q9H3S4 243 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 C11orf49Q9H6J7 331 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 COPS7BQ9H9Q2 264 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZNF358Q9NW07 568 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 SYBUQ9NX95 663 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 RCOR3Q9P2K3 495 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 VTI1BQ9UEU0 232 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 COQ6Q9Y2Z9 468 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms