RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MSLNQ13421 630 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 FGD3Q5JSP0 725 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 FAM171BQ6P995 826 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 GPR135Q8IZ08 494 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TATDN2Q93075 761 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TOX2Q96NM4 488 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 SFXN1Q9H9B4 322 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 NECTIN3Q9NQS3 549 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 CLIC5Q9NZA1 410 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ESYT3A0FGR9 886 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TRIM49D1C9J1S8 452 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 NR5A2O00482 541 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 RGS14O43566 566 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 PTPN9P43378 593 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 LGALS3BPQ08380 585 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 RSBN1Q5VWQ0 802 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 DBF4BQ8NFT6 615 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TSPAN14Q8NG11 270 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 OR56A4Q8NGH8 313 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 HNRNPABQ99729 332 aaKnown RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 STXBP5LQ9Y2K9 1186 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 GSTK1Q9Y2Q3 226 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ASTN1O14525 1302 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 hCG_2014768A0A024R1R8 64 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 AOC2O75106 756 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 ADAMTSL2Q86TH1 951 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 SLC26A11Q86WA9 606 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 FEM1CQ96JP0 617 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 ZBTB45Q96K62 511 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 PCBD2Q9H0N5 130 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 PCDHAC2Q9Y5I4 1007 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 IGLV3-22A0A075B6J6 115 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 POP4O95707 220 aaKnown RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 RHOQP17081 205 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 FSHRP23945 695 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 GP5P40197 560 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 PLIN5Q00G26 463 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 MTAPQ13126 283 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 C9orf72Q96LT7 481 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 BATF3Q9NR55 127 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 NEMP2A6NFY4 417 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 TSPAN19P0C672 248 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 ZC3H14Q6PJT7 736 aaKnown RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 GET4Q7L5D6 327 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 STRA8Q7Z7C7 330 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 ACMSDQ8TDX5 336 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 CENPIQ92674 756 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 HAVCR1Q96D42 359 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 SPATA9Q9BWV2 254 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 UGT2B28Q9BY64 529 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 IRX2Q9BZI1 471 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 CORO2BQ9UQ03 480 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 E7ENQ6 273 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 CHN1P15882 459 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 ADRA1DP25100 572 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 RPL21P46778 160 aaKnown RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 SMU1Q2TAY7 513 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 BNC2Q6ZN30 1099 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 TFAP2DQ7Z6R9 452 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 ACTRT2Q8TDY3 377 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 PRDM8Q9NQV8 689 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 NDUFA13Q9P0J0 144 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 FZD1Q9UP38 647 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 TFE3P19532 575 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 SMIM11AP58511 58 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 PCID2Q5JVF3 399 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 NRDE2Q9H7Z3 1164 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 EPN2O95208 641 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 MED26O95402 600 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 CYP1A2P05177 515 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 NRG3P56975 720 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 SMCO1Q147U7 214 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 MZT2AQ6P582 158 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 KYAT3Q6YP21 454 aaKnown RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 SLC26A9Q7LBE3 791 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF571Q7Z3V5 609 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 TTC7BQ86TV6 843 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 FBXO39Q8N4B4 442 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 CCDC54Q8NEL0 328 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF354BQ96LW1 612 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 PCDHB1Q9Y5F3 818 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 RBBP6Q7Z6E9 1792 aaKnown RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 H3BUI4 141 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 CCDC166P0CW27 439 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 CLUP10909 449 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 KDELR1P24390 212 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 RPA3P35244 121 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 UGT1A5P35504 534 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 TIMM50Q3ZCQ8 353 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 ARSJQ5FYB0 599 aaPredicted RBP8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 KAT2BQ92831 832 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 GDAP2Q9NXN4 497 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 MFHAS1Q9Y4C4 1052 aa8.36□□□□□ -1.07
PCDHB1-201ENST00000306549 MDM4O15151 490 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 CILPO75339 1184 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 MMP8P22894 467 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 MAMLD1Q13495 774 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF57Q68EA5 555 aaPredicted RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 CDCA2Q69YH5 1023 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms