RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CACNA2D2Q9NY47 1150 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 MAP10Q9P2G4 905 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 FBXO5Q9UKT4 447 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 CAPN7Q9Y6W3 813 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PRMT5O14744 637 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 RPP40O75818 363 aaKnown RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 HLA-EP13747 358 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 CTGFP29279 349 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ARHGDIAP52565 204 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 CDC16Q13042 620 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PDCD2Q16342 344 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ZSCAN26Q16670 478 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PITRM1Q5JRX3 1037 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 BRAT1Q6PJG6 821 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 GBP7Q8N8V2 638 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 SPATA22Q8NHS9 363 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PCDH19Q8TAB3 1148 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PCDHB11Q9Y5F2 797 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 LAMB2P55268 1798 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 F8W810 466 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 PRAMEF1O95521 474 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 ANXA11P50995 505 aaKnown RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 KCNK10P57789 538 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 IRF8Q02556 426 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 DSC3Q14574 896 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 DHCR24Q15392 516 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 PPP4R4Q6NUP7 873 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 CERS6Q6ZMG9 384 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 TAS1R1Q7RTX1 841 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 AVL9Q8NBF6 648 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 STAG3L4Q8TBR4 150 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 RERGQ96A58 199 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 NPY6RQ99463 290 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 SYBUQ9NX95 663 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 CXXC1Q9P0U4 656 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 PNMA8BQ9ULN7 279 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 ANKRD6Q9Y2G4 727 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 C2orf71A6NGG8 1288 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 PHGDHO43175 533 aaKnown RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 E2F6O75461 281 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 KRT20P35900 424 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 DUSP3P51452 185 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 PTP4A2Q12974 167 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 CERCAMQ5T4B2 595 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 CAMK1DQ8IU85 385 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 STYXQ8WUJ0 223 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 KBTBD7Q8WVZ9 684 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 FAM3CQ92520 227 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 KLHL3Q9UH77 587 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 TNPO3Q9Y5L0 923 aaKnown RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 A0A087X1B8 175 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 HIDE1A8MVS5 230 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 BEST1O76090 585 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 ITGAXP20702 1163 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 HCAR3P49019 387 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 CCNHP51946 323 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 ALDH18A1P54886 795 aaKnown RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 ERVFC1P60507 584 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 FBXO43Q4G163 708 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 MILR1Q7Z6M3 343 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 ZNF567Q8N184 647 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 NIPA2Q8N8Q9 360 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 UBE2E3Q969T4 207 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 EBNA1BP2Q99848 306 aaKnown RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 CLSTN3Q9BQT9 956 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 CDH19Q9H159 772 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 RUBCNLQ9H714 662 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 HCFC1R1Q9NWW0 138 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 DNAJC28Q9NX36 388 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 COLEC10Q9Y6Z7 277 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 TMEM265A0A087WTH1 108 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 A0A0U1RQJ8 604 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 TCRBV21S2A2A0A5A6 115 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 EVPLLA8MZ36 301 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 WNT9AO14904 365 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 GYG2O15488 501 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 BMP10O95393 424 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 ADH1BP00325 375 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 SLC8A1P32418 973 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 ALDH9A1P49189 494 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 CACNG1Q06432 222 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 EIF4HQ15056 248 aaKnown RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 PLEKHG6Q3KR16 790 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 HLA-DQA1Q5Y7H0 255 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 C22orf39Q6P5X5 142 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 CHST15Q7LFX5 561 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-202ENST00000306042 KRT78Q8N1N4 520 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 TTC9BQ8N6N2 239 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 OR56A4Q8NGH8 313 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 KATNBL1Q9H079 304 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 WDR26Q9H7D7 661 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 NPHS2Q9NP85 383 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 NINJ2Q9NZG7 142 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 DTLQ9NZJ0 730 aa9.29□□□□□ -0.92
PTPRE-202ENST00000306042 GCATO75600 419 aa9.28□□□□□ -0.92
PTPRE-202ENST00000306042 MT-CYBP00156 380 aaPredicted RBP9.28□□□□□ -0.92
PTPRE-202ENST00000306042 HPGDP15428 266 aa9.28□□□□□ -0.92
PTPRE-202ENST00000306042 ACVRL1P37023 503 aa9.28□□□□□ -0.92
PTPRE-202ENST00000306042 CNTN1Q12860 1018 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms