RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 CFHP08603 1231 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 IDO1P14902 403 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 CRATP43155 626 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 FLT3LGP49771 235 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 ATXN1P54253 815 aaKnown RBP16.41■□□□□ 0.22
BRD3-201ENST00000303407 CASP12Q6UXS9 341 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 ZYG11AQ6WRX3 759 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.41■□□□□ 0.22
BRD3-201ENST00000303407 NLGN2Q8NFZ4 835 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 NXNL1Q96CM4 212 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 POLD2P49005 469 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 LILRA4P59901 499 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 MPP1Q00013 466 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 SP2Q02086 613 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 MAGEC3Q8TD91 643 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 PTCD2Q8WV60 388 aaKnown RBP16.41■□□□□ 0.22
BRD3-201ENST00000303407 RORBQ92753 470 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 PPP1R16AQ96I34 528 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 TTPALQ9BTX7 342 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 CHKBQ9Y259 395 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 C5P01031 1676 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 C1DQ13901 141 aaKnown RBP16.41■□□□□ 0.22
BRD3-201ENST00000303407 MAPKAPK3Q16644 382 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 BNIPLQ7Z465 357 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 TAC4Q86UU9 113 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 PCDH19Q8TAB3 1148 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 BBS4Q96RK4 519 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 CCDC3Q9BQI4 270 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 SLC12A4Q9UP95 1085 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 PRR23D1E9PI22 279 aaPredicted RBP16.41■□□□□ 0.22
BRD3-201ENST00000303407 KPNA5O15131 536 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 PRR23D2P0DMB1 279 aaPredicted RBP16.41■□□□□ 0.22
BRD3-201ENST00000303407 CDH13P55290 713 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 FAXDC2Q96IV6 333 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 KLHL28Q9NXS3 571 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 COL6A2P12110 1019 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 FOLH1Q04609 750 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 GRM3Q14832 879 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 CNSTQ6PJW8 725 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 GCNT7Q6ZNI0 430 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 MYO19Q96H55 970 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 REEP1Q9H902 201 aa16.41■□□□□ 0.22
BRD3-201ENST00000303407 CARNS1A5YM72 827 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 MAP3K13O43283 966 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 HOXD13P35453 343 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 LIMK2P53671 638 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 KLF10Q13118 480 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 VSTM1Q6UX27 236 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 VPS45Q9NRW7 570 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 RECQL5O94762 991 aaPredicted RBP16.4■□□□□ 0.22
BRD3-201ENST00000303407 PPIDQ08752 370 aaKnown RBP16.4■□□□□ 0.22
BRD3-201ENST00000303407 ZNF438Q7Z4V0 828 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 METTL3Q86U44 580 aaKnown RBP16.4■□□□□ 0.22
BRD3-201ENST00000303407 AADATQ8N5Z0 425 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 CXorf40AQ8TE69 158 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 PAWRQ96IZ0 340 aaKnown RBP16.4■□□□□ 0.22
BRD3-201ENST00000303407 ZNF536O15090 1300 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 CHADLQ6NUI6 762 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 SPATA22Q8NHS9 363 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 NELL1Q92832 810 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 ACBD6Q9BR61 282 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 PCDHB9Q9Y5E1 797 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 SCN11AQ9UI33 1791 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 LINC00854A0A1B0GVQ3 168 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 CREB1P16220 341 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 NMBRP28336 390 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 HTR7P34969 479 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 ATAD3BQ5T9A4 648 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 VWA5B1Q5TIE3 1220 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 CYP4X1Q8N118 509 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 OR6K2Q8NGY2 324 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 ATL1Q8WXF7 558 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 MCRS1Q96EZ8 462 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 CLPTM1LQ96KA5 538 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 CAB39Q9Y376 341 aaPredicted RBP16.4■□□□□ 0.22
BRD3-201ENST00000303407 TCAF1Q9Y4C2 921 aa16.4■□□□□ 0.22
BRD3-201ENST00000303407 KLRG2A4D1S0 409 aaPredicted RBP16.39■□□□□ 0.21
BRD3-201ENST00000303407 SIN3BO75182 1162 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 IPO13O94829 963 aaKnown RBP16.39■□□□□ 0.21
BRD3-201ENST00000303407 RHOQP17081 205 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 OR1D2P34982 312 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 DSC2Q02487 901 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 KCNA10Q16322 511 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 SLC44A4Q53GD3 710 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 SLC39A4Q6P5W5 647 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 ATAD1Q8NBU5 361 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 RBM15BQ8NDT2 890 aaKnown RBP16.39■□□□□ 0.21
BRD3-201ENST00000303407 SPPL2BQ8TCT7 592 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 MFSD3Q96ES6 412 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 POLR3HQ9Y535 204 aaPredicted RBP16.39■□□□□ 0.21
BRD3-201ENST00000303407 PHRF1Q9P1Y6 1649 aaKnown RBP16.39■□□□□ 0.21
BRD3-201ENST00000303407 LRIG2O94898 1065 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 FTH1P02794 183 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 PABPC1P11940 636 aaKnown RBP16.39■□□□□ 0.21
BRD3-201ENST00000303407 SEMA5AQ13591 1074 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 KRR1Q13601 381 aaKnown RBP16.39■□□□□ 0.21
BRD3-201ENST00000303407 CCDC92Q53HC0 331 aaPredicted RBP16.39■□□□□ 0.21
BRD3-201ENST00000303407 BANPQ8N9N5 519 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 TSPAN14Q8NG11 270 aa16.39■□□□□ 0.21
BRD3-201ENST00000303407 SUSD6Q92537 303 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms